PMAA_037770 (Penicillium marneffei)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 PMAA_037770 T06492_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_037770.t1 CCCH ZF 184 208

Links

Other CCCH ZF family RBPs
Other Penicillium marneffei RBPs

223 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ANIA_07755 Aspergillus nidulans CADANIAG00000892 N 0.852
e_gw1.1.717.1 Myceliophthora thermophila e_gw1.1.717.1 N 0.840
EDO07311.1 Babesia bovis EDO07311.1 N 0.815
ZYRO0G10956g Zygosaccharomyces rouxii ZYRO0G10956g N 0.800
gw1.27.284.1 Neurospora tetrasperma gw1.27.284.1 N 0.800
gw1.1.1618.1 Thielavia terrestris gw1.1.1618.1 N 0.800
estExt_fgenesh2_pg.C_20402 Neurospora discreta estExt_fgenesh2_pg.C_20402 N 0.800
NCU01954 Neurospora crassa NCU01954 N 0.800
Pa_1_20620 Podospora anserina Pa_1_20620 N 0.800
185736 Helobdella robusta 185736 N 0.778
SPRG_10807 Saprolegnia parasitica SPRG_10807 N 0.778
SPRG_14175 Saprolegnia parasitica SPRG_14175 N 0.778
GE25648 Drosophila yakuba FBgn0242710 N 0.778
GD19337 Drosophila simulans FBgn0190839 N 0.778
gww2.6.423.1 Phanerochaete chrysosporium gww2.6.423.1 N 0.778
GI22714 Drosophila mojavensis FBgn0145441 N 0.778
GL12088 Drosophila persimilis FBgn0149696 N 0.778
GM17684 Drosophila sechellia FBgn0172592 N 0.778
SJAG_03112 Schizosaccharomyces japonicus SJAG_03112 N 0.778
CMU_031370 Cryptosporidium muris CMU_031370 N 0.778
AAEL001778 Aedes aegypti AAEL001778 N 0.778
AGAP007068 Anopheles gambiae AGAP007068 N 0.778
CPIJ004936 Culex quinquefasciatus CPIJ004936 N 0.778
CWC24 Saccharomyces cerevisiae YLR323C N 0.778
cwf24 Schizosaccharomyces pombe SPBC13E7.02 N 0.778
estExt_GeneWisePlus_human.C_50103 Laccaria bicolor estExt_GeneWisePlus_human.C_50103 N 0.778
ISCW023200 Ixodes scapularis ISCW023200 N 0.778
RNF113A Choloepus hoffmanni ENSCHOG00000008711 N 0.778
UM05163 Ustilago maydis UM05163 N 0.778
GG23724 Drosophila erecta FBgn0115865 N 0.778
estExt_fgenesh1_pm.C_chr_30248 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_30248 N 0.778
GH22886 Drosophila grimshawi FBgn0130343 N 0.778
estExt_fgenesh2_kg.C_62064 Serpula lacrymans estExt_fgenesh2_kg.C_62064 N 0.778
GF17636 Drosophila ananassae FBgn0094654 N 0.778
e_gw1.5.501.1 Pleurotus ostreatus e_gw1.5.501.1 N 0.778
estExt_fgenesh2_pg.C_50080 Agaricus bisporus estExt_fgenesh2_pg.C_50080 N 0.778
YALI0C22484g Yarrowia lipolytica YALI0C22484g N 0.778
SAKL0H22880g Lachancea kluyveri SAKL0H22880g N 0.778
Kwal_17638 Kluyveromyces waltii Kwal_17638 N 0.778
CpipJ_CPIJ004936 Culex pipiens CpipJ_CPIJ004936 N 0.778
BDBG_04068 Blastomyces dermatitidis BDBG_04068 N 0.778
GK22373 Drosophila willistoni FBgn0067112 N 0.778
GA18564-RA Drosophila pseudoobscura FBgn0064425 N 0.778
CG4973 Drosophila melanogaster FBgn0038772 N 0.778
Skud_Contig756.2 Saccharomyces kudriavzevii Skud_Contig756.2 N 0.778
HCAG_02941 Histoplasma capsulatum HCAG_02941 N 0.778
ATEG_08357 Aspergillus terreus CADATEAG00004925 N 0.760
ENSSARG00000010436 Sorex araneus ENSSARG00000010436 N 0.741
ENSSSCG00000012610 Sus scrofa ENSSSCG00000012610 N 0.741
RNF113A Pan troglodytes ENSPTRG00000022231 N 0.741
29733.m000748 Ricinus communis 29733.m000748 N 0.741
ENSPPYG00000005460 Pongo pygmaeus ENSPPYG00000005460 N 0.741
ENSPPYG00000020676 Pongo pygmaeus ENSPPYG00000020676 N 0.741
ppa009728m Prunus persica ppa009728m N 0.741
Rnf113a1 Rattus norvegicus ENSRNOG00000034040 N 0.741
SB04G009270 Sorghum bicolor Sb04g009270 N 0.741
GSVIVG00027082001 Vitis vinifera GSVIVG00027082001 N 0.741
RNF113A Taeniopygia guttata ENSTGUG00000001947 N 0.741
RNF113B Tetraodon nigroviridis ENSTNIG00000014938 N 0.741
GJ23438 Drosophila virilis FBgn0210538 N 0.741
RNF113B Takifugu rubripes ENSTRUG00000011142 N 0.741
rnf113a Xenopus tropicalis ENSXETG00000002042 N 0.741
RNF113A Tupaia belangeri ENSTBEG00000012687 N 0.741
RNF113A Vicugna pacos ENSVPAG00000004521 N 0.741
PHUM169980 Pediculus humanus PHUM169980 N 0.741
ENSSSCG00000012616 Sus scrofa ENSSSCG00000012616 N 0.741
LOC_Os02g19804 Oryza sativa LOC_Os02g19804 N 0.741
XM_002892025.1 Arabidopsis lyrata scaffold_100114.1 N 0.741
estExt_GenewiseH_1.C_3140043 Nematostella vectensis estExt_GenewiseH_1.C_3140043 N 0.741
Ame_R010811 Ailuropoda melanoleuca Ame_R010811 N 0.741
CAGL0A00935g Candida glabrata CAGL0A00935g N 0.741
chr1.CM0088.900.nc Lotus japonicus chr1.CM0088.900.nc N 0.741
A7TKV6_VANPO Vanderwaltozyma polyspora A7TKV6_VANPO N 0.741
15643_YLR323C Saccharomyces paradoxus 15643_YLR323C N 0.741
Medtr7g132670 Medicago truncatula Medtr7g132670 N 0.741
BGIBMGA000186 Bombyx mori BGIBMGA000186 N 0.741
15153_YLR323C Saccharomyces mikatae 15153_YLR323C N 0.741
e_gw1.00866.533.1 Aspergillus carbonarius e_gw1.00866.533.1 N 0.741
estExt_fgenesh1_pm.C_110126 Cryphonectria parasitica estExt_fgenesh1_pm.C_110126 N 0.741
MDP0000274000 Malus x domestica MDP0000274000 N 0.741
Minc18333 Meloidogyne incognita Minc18333 N 0.741
Pc22g15470 Penicillium chrysogenum Pc22g15470 N 0.741
MDP0000202598 Malus x domestica MDP0000202598 N 0.741
MDP0000182690 Malus x domestica MDP0000182690 N 0.741
estExt_fgenesh2_pg.C_30366 Heterobasidion annosum estExt_fgenesh2_pg.C_30366 N 0.741
GSTUMT00004845001 Tuber melanosporum GSTUMT00004845001 N 0.741
KLTH0E08580g Kluyveromyces thermotolerans KLTH0E08580g N 0.741
Medtr7g132570 Medicago truncatula Medtr7g132570 N 0.741
GRMZM2G373653 Zea mays GRMZM2G373653 N 0.741
estExt_Genewise1.C_sca_120492 Lottia gigantea estExt_Genewise1.C_sca_120492 N 0.741
RNF113A Procavia capensis ENSPCAG00000014633 N 0.741
estExt_gwp_gw1.C_1140075 Physcomitrella patens estExt_gwp_gw1.C_1140075 N 0.741
estExt_Genewise1.C_340021 Melampsora laricis populina estExt_Genewise1.C_340021 N 0.741
estExt_Genewise1.C_10555 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10555 N 0.741
4131 Aureococcus anophagefferens 4131 N 0.741
e_gw1.8.388.1 Schizophyllum commune e_gw1.8.388.1 N 0.741
estExt_fgenesh1_pg.C_5430007 Capitella teleta estExt_fgenesh1_pg.C_5430007 N 0.741
fgenesh2_pg.C_scaffold_6000249 Selaginella moellendorfii fgenesh2_pg.C_scaffold_6000249 N 0.741
Glyma03g02920.1 Glycine max Glyma03g02920.1 N 0.741
mgf009866m Mimulus guttatus mgf009866m N 0.741
PASA_GEN_19100012 Daphnia pulex PASA_GEN_19100012 N 0.741
s_444298 Phytophthora sojae s_444298 N 0.741
gw1.9.174.1 Postia placenta gw1.9.174.1 N 0.741
gw1.63.49.1 Postia placenta gw1.63.49.1 N 0.741
Glyma05g37520.1 Glycine max Glyma05g37520.1 N 0.741
gw1.1.878.1 Batrachochytrium dendrobatidis gw1.1.878.1 N 0.741
gw1.2.524.1 Monosiga brevicollis gw1.2.524.1 N 0.741
29733.m000763 Ricinus communis 29733.m000763 N 0.741
RNF113B Pan troglodytes ENSPTRG00000005987 N 0.741
amel4_ncbi_hmm8953 Apis mellifera amel4_ncbi_hmm8953 N 0.741
DGIL_AUG5s12567g4t1 Acyrtosiphon pisum DGIL_AUG5s12567g4t1 N 0.741
nasonia_NCBI_hmm132664 Nasonia vitripennis nasonia_NCBI_hmm132664 N 0.741
AAR97523 Xenopus laevis AAR97523 N 0.741
PK05761.1 Cannabis sativa PK05761.1 N 0.741
ARB_03970 Arthroderma benhamiae ARB_03970 N 0.741
Q67EQ7_ORYLA Oryzias latipes ENSORLG00000002442 N 0.741
AT1G01350 Arabidopsis thaliana AT1G01350-TAIR-G N 0.741
AT5G06420 Arabidopsis thaliana AT5G06420-TAIR-G N 0.741
AFUA_5G07720 Aspergillus fumigatus CADAFUAG00006406 N 0.741
An02g05190 Aspergillus niger CADANGAG00002035 N 0.741
XP_002490540.1 Pichia pastoris XP_002490540.1 N 0.741
ACLA_012790 Aspergillus clavatus CADACLAG00001301 N 0.741
AAI33788 Xenopus laevis AAI33788 N 0.741
BGIOSIBCE006607 Oryza indica BGIOSIBCE006607 N 0.741
BRADI3G09570 Brachypodium distachyon BRADI3G09570 N 0.741
UREG_07314 Uncinocarpus reesii UREG_07314 N 0.741
CC1G_03236 Coprinopsis cinerea CC1G_03236 N 0.741
PITG_04905 Phytophthora infestans PITG_04905 N 0.741
PTRG_10816 Pyrenophora tritici repentis PTRG_10816 N 0.741
PTSG_02658 Salpingoeca rosetta PTSG_02658 N 0.741
PABG_00271 Paracoccidioides brasiliensis PABG_00271 N 0.741
FGSG_08901 Fusarium graminearum FGSG_08901 N 0.741
MCYG_07006 Microsporum canis MCYG_07006 N 0.741
MGYG_03604 Microsporum gypseum MGYG_03604 N 0.741
CPSG_00950 Coccidioides posadasii CPSG_00950 N 0.741
CIMG_06140 Coccidioides immitis CIMG_06140 N 0.741
TESG_00049 Trichophyton tonsurans TESG_00049 N 0.741
TRV_01821 Trichophyton verrucosum TRV_01821 N 0.741
TERG_03941 Trichophyton rubrum TERG_03941 N 0.741
TEQG_05573 Trichophyton equinum TEQG_05573 N 0.741
SOCG_00229 Schizosaccharomyces octosporus SOCG_00229 N 0.741
SPOG_02814 Schizosaccharomyces cryophilus SPOG_02814 N 0.741
XP_002169878.1 Hydra magnipapillata XP_002169878.1 N 0.741
AAH97882 Xenopus laevis AAH97882 N 0.741
Rnf113a1 Mus musculus ENSMUSG00000036537 N 0.741
RNF113B Macaca mulatta ENSMMUG00000022250 N 0.741
RNF113B Gasterosteus aculeatus ENSGACG00000009738 N 0.741
RNF113B Homo sapiens ENSG00000139797 N 0.741
ENSOANG00000002592 Ornithorhynchus anatinus ENSOANG00000002592 N 0.741
ENSECAG00000004638 Equus caballus ENSECAG00000004638 N 0.741
RNF113A Echinops telfairi ENSETEG00000018346 N 0.741
RNF113A Homo sapiens ENSG00000125352 N 0.741
Q67ER3_CHICK Gallus gallus ENSGALG00000000538 N 0.741
RNF113A Gorilla gorilla ENSGGOG00000002324 N 0.741
ENSMGAG00000001753 Meleagris gallopavo ENSMGAG00000001753 N 0.741
RNF113A Microcebus murinus ENSMICG00000001750 N 0.741
ENSMLUG00000010856 Myotis lucifugus ENSMLUG00000010856 N 0.741
ENSMEUG00000001855 Macropus eugenii ENSMEUG00000001855 N 0.741
RNF113A Macaca mulatta ENSMMUG00000020223 N 0.741
RNF113B Gorilla gorilla ENSGGOG00000023052 N 0.741
RNF113A Loxodonta africana ENSLAFG00000013906 N 0.741
RNF113A Dasypus novemcinctus ENSDNOG00000015321 N 0.741
LOC100058519 Equus caballus ENSECAG00000003934 N 0.741
RNF113A Oryctolagus cuniculus ENSOCUG00000016207 N 0.741
TP01_0812 Theileria parva TP01_0812 N 0.741
LOC518027 Bos taurus ENSBTAG00000008684 N 0.741
RNF113A Otolemur garnettii ENSOGAG00000016171 N 0.741
ENSACAG00000012485 Anolis carolinensis ENSACAG00000012485 N 0.741
R113A_BOVIN Bos taurus ENSBTAG00000006034 N 0.741
TA05795 Theileria annulata TA05795 N 0.741
XM_538154.2 Canis familiaris ENSCAFG00000018430 N 0.741
ENSCSAVG00000006210 Ciona savignyi ENSCSAVG00000006210 N 0.741
rnf113a Danio rerio ENSDARG00000037930 N 0.741
NP_001027830.1 Ciona intestinalis ENSCING00000009197 N 0.741
LOC100388689 Callithrix jacchus ENSCJAG00000022327 N 0.741
RNF113B Callithrix jacchus ENSCJAG00000004501 N 0.741
rnf113 Dictyostelium discoideum DDB_G0267870 N 0.731
CHGG_06589 Chaetomium globosum CHGG_06589 N 0.720
FOXG_03625 Fusarium oxysporum FOXG_03625 N 0.704
Smp_033590 Schistosoma mansoni Smp_033590 N 0.704
FVEG_11063 Fusarium verticillioides FVEG_11063 N 0.704
16613_YLR323C Saccharomyces bayanus 16613_YLR323C N 0.704
GLRG_04651 Colletotrichum graminicola GLRG_04651 N 0.704
estExt_fgenesh1_pm.C_170027 Phytophthora capsici estExt_fgenesh1_pm.C_170027 N 0.704
LOAG_01140 Loa loa LOAG_01140 N 0.704
XP_001196290.1 Strongylocentrotus purpuratus XP_001196290.1 N 0.704
XP_783481.2 Strongylocentrotus purpuratus XP_783481.2 N 0.704
LjSGA_011721.2 Lotus japonicus LjSGA_011721.2 N 0.704
KLLA0C18260g Kluyveromyces lactis KLLA0C18260g N 0.704
estExt_Genewise1Plus.C_21344 Tremella mesenterica estExt_Genewise1Plus.C_21344 N 0.704
CAOG_06860 Capsaspora owczarzaki CAOG_06860 N 0.704
Bm1_06930 Brugia malayi Bm1_06930 N 0.704
BC1G_08876 Botrytis cinerea BC1G_08876 N 0.704
CWC24 Ashbya gossypii CWC24 N 0.704
WUBG_06682 Wuchereria bancrofti WUBG_06682 N 0.704
Aqu1.217710 Amphimedon queenslandica Aqu1.217710 N 0.704
CBG18314 Caenorhabditis briggsae CBG18314 N 0.704
Cucsa.060530 Cucumis sativus Cucsa.060530 N 0.704
e_gw1.2.1336.1 Trichoplax adhaerens e_gw1.2.1336.1 N 0.704
estExt_Genewise1Plus.C_80076 Volvox carteri estExt_Genewise1Plus.C_80076 N 0.704
estExt_Genewise1.C_120284 Chlorella NC64A estExt_Genewise1.C_120284 N 0.704
CBN12332 Caenorhabditis brenneri CBN12332 N 0.704
CJA02847 Caenorhabditis japonica CJA02847 N 0.704
rnf-113 Caenorhabditis elegans K01G5.1 N 0.704
ENSMLUG00000016812 Myotis lucifugus ENSMLUG00000016812 N 0.704
XM_537309.2 Canis familiaris ENSCAFG00000018373 N 0.704
Ppa-tag-331 Pristionchus pacificus PPA25510 N 0.704
CRE04837 Caenorhabditis remanei CRE04837 N 0.704
estExt_gwp_1W.C_30096 Chlamydomonas reinhardtii estExt_gwp_1W.C_30096 N 0.704
VDAG_02435 Verticillium dahliae VDAG_02435 N 0.704
EAT76222.1 Phaeosphaeria nodorum EAT76222.1 N 0.704
SNOG_16397 Stagonospora nodorum SNOG_16397 N 0.704
EFA78387.1 Polysphondylium pallidum EFA78387.1 N 0.704
MGG_02960 Magnaporthe oryzae MGG_02960 N 0.704
Medtr8g068390 Medicago truncatula Medtr8g068390 N 0.704
gw1.9.306.1 Micromonas pusilla gw1.9.306.1 N 0.704
SPPG_00604 Spizellomyces punctatus SPPG_00604 N 0.704
fgenesh2_pg.scaffold_2135000001 Branchiostoma floridae fgenesh2_pg.scaffold_2135000001 N 0.704
fgenesh1_pg.C_scaffold_13000094 Phytophthora ramorum fgenesh1_pg.C_scaffold_13000094 N 0.704
fgenesh2_pm.scaffold_144000004 Branchiostoma floridae fgenesh2_pm.scaffold_144000004 N 0.704
fgeneshDP_pg.C_scaffold_172000011 Dictyostelium purpureum fgeneshDP_pg.C_scaffold_172000011 N 0.704
SS1G_11427 Sclerotinia sclerotiorum SS1G_11427 N 0.704
PredSwiss_CON4272.1 Pneumocystis carinii PredSwiss_CON4272.1 N 0.704