CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_00049
(
Trichophyton tonsurans
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
TESG_00049
T01666_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_00049T0
CCCH ZF
171
197
YAPDVCKDYKRTGFCGFGDSCKYLHAR
Links
Other
CCCH ZF
family RBPs
Other
Trichophyton tonsurans
RBPs
233 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MGYG_03604
Microsporum gypseum
MGYG_03604
N
1.000
ARB_03970
Arthroderma benhamiae
ARB_03970
N
1.000
TEQG_05573
Trichophyton equinum
TEQG_05573
N
1.000
TERG_03941
Trichophyton rubrum
TERG_03941
N
1.000
TRV_01821
Trichophyton verrucosum
TRV_01821
N
1.000
MCYG_07006
Microsporum canis
MCYG_07006
N
0.926
GSTUMT00004845001
Tuber melanosporum
GSTUMT00004845001
N
0.889
EAT76222.1
Phaeosphaeria nodorum
EAT76222.1
N
0.889
MGG_02960
Magnaporthe oryzae
MGG_02960
N
0.889
SNOG_16397
Stagonospora nodorum
SNOG_16397
N
0.889
SS1G_11427
Sclerotinia sclerotiorum
SS1G_11427
N
0.889
BC1G_08876
Botrytis cinerea
BC1G_08876
N
0.889
GLRG_04651
Colletotrichum graminicola
GLRG_04651
N
0.889
estExt_fgenesh1_pm.C_chr_30248
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_30248
N
0.889
estExt_Genewise1.C_10555
Cochliobolus heterostrophus C5
estExt_Genewise1.C_10555
N
0.852
e_gw1.1.717.1
Myceliophthora thermophila
e_gw1.1.717.1
N
0.852
CIMG_06140
Coccidioides immitis
CIMG_06140
N
0.852
estExt_fgenesh1_pm.C_110126
Cryphonectria parasitica
estExt_fgenesh1_pm.C_110126
N
0.852
RNF113A
Choloepus hoffmanni
ENSCHOG00000008711
N
0.852
PTRG_10816
Pyrenophora tritici repentis
PTRG_10816
N
0.852
SPRG_10807
Saprolegnia parasitica
SPRG_10807
N
0.852
SPRG_14175
Saprolegnia parasitica
SPRG_14175
N
0.852
ACLA_012790
Aspergillus clavatus
CADACLAG00001301
N
0.852
PABG_00271
Paracoccidioides brasiliensis
PABG_00271
N
0.852
CPSG_00950
Coccidioides posadasii
CPSG_00950
N
0.852
AFUA_5G07720
Aspergillus fumigatus
CADAFUAG00006406
N
0.852
estExt_fgenesh2_pg.C_20402
Neurospora discreta
estExt_fgenesh2_pg.C_20402
N
0.815
estExt_fgenesh1_pg.C_5430007
Capitella teleta
estExt_fgenesh1_pg.C_5430007
N
0.815
PITG_04905
Phytophthora infestans
PITG_04905
N
0.815
estExt_Genewise1.C_340021
Melampsora laricis populina
estExt_Genewise1.C_340021
N
0.815
gw1.1.1618.1
Thielavia terrestris
gw1.1.1618.1
N
0.815
fgenesh2_pg.C_scaffold_6000249
Selaginella moellendorfii
fgenesh2_pg.C_scaffold_6000249
N
0.815
estExt_GenewiseH_1.C_3140043
Nematostella vectensis
estExt_GenewiseH_1.C_3140043
N
0.815
estExt_Genewise1.C_sca_120492
Lottia gigantea
estExt_Genewise1.C_sca_120492
N
0.815
BDBG_04068
Blastomyces dermatitidis
BDBG_04068
N
0.815
PHUM169980
Pediculus humanus
PHUM169980
N
0.815
RNF113A
Taeniopygia guttata
ENSTGUG00000001947
N
0.815
RNF113A
Tupaia belangeri
ENSTBEG00000012687
N
0.815
ENSSSCG00000012616
Sus scrofa
ENSSSCG00000012616
N
0.815
ENSSSCG00000012610
Sus scrofa
ENSSSCG00000012610
N
0.815
RNF113B
Tetraodon nigroviridis
ENSTNIG00000014938
N
0.815
RNF113B
Takifugu rubripes
ENSTRUG00000011142
N
0.815
NCU01954
Neurospora crassa
NCU01954
N
0.815
rnf113a
Xenopus tropicalis
ENSXETG00000002042
N
0.815
RNF113A
Vicugna pacos
ENSVPAG00000004521
N
0.815
gw1.27.284.1
Neurospora tetrasperma
gw1.27.284.1
N
0.815
PASA_GEN_19100012
Daphnia pulex
PASA_GEN_19100012
N
0.815
Pc22g15470
Penicillium chrysogenum
Pc22g15470
N
0.815
Pa_1_20620
Podospora anserina
Pa_1_20620
N
0.815
Kwal_17638
Kluyveromyces waltii
Kwal_17638
N
0.815
ENSSARG00000010436
Sorex araneus
ENSSARG00000010436
N
0.815
XP_002169878.1
Hydra magnipapillata
XP_002169878.1
N
0.815
YALI0C22484g
Yarrowia lipolytica
YALI0C22484g
N
0.815
AAR97523
Xenopus laevis
AAR97523
N
0.815
AAI33788
Xenopus laevis
AAI33788
N
0.815
AAH97882
Xenopus laevis
AAH97882
N
0.815
AMAG_15438
Allomyces macrogynus
AMAG_15438
N
0.815
estExt_fgenesh2_pg.C_30366
Heterobasidion annosum
estExt_fgenesh2_pg.C_30366
N
0.815
BGIBMGA000186
Bombyx mori
BGIBMGA000186
N
0.815
PredSwiss_CON4272.1
Pneumocystis carinii
PredSwiss_CON4272.1
N
0.815
CC1G_03236
Coprinopsis cinerea
CC1G_03236
N
0.815
s_444298
Phytophthora sojae
s_444298
N
0.815
A7TKV6_VANPO
Vanderwaltozyma polyspora
A7TKV6_VANPO
N
0.815
Ame_R010811
Ailuropoda melanoleuca
Ame_R010811
N
0.815
HCAG_02941
Histoplasma capsulatum
HCAG_02941
N
0.815
e_gw1.00866.533.1
Aspergillus carbonarius
e_gw1.00866.533.1
N
0.815
EDO07311.1
Babesia bovis
EDO07311.1
N
0.815
AMAG_06522
Allomyces macrogynus
AMAG_06522
N
0.815
e_gw1.8.388.1
Schizophyllum commune
e_gw1.8.388.1
N
0.815
nasonia_NCBI_hmm132664
Nasonia vitripennis
nasonia_NCBI_hmm132664
N
0.815
DGIL_AUG5s12567g4t1
Acyrtosiphon pisum
DGIL_AUG5s12567g4t1
N
0.815
RNF113B
Gorilla gorilla
ENSGGOG00000023052
N
0.815
Q67ER3_CHICK
Gallus gallus
ENSGALG00000000538
N
0.815
RNF113B
Gasterosteus aculeatus
ENSGACG00000009738
N
0.815
RNF113A
Homo sapiens
ENSG00000125352
N
0.815
RNF113B
Homo sapiens
ENSG00000139797
N
0.815
RNF113A
Loxodonta africana
ENSLAFG00000013906
N
0.815
ENSMEUG00000001855
Macropus eugenii
ENSMEUG00000001855
N
0.815
RNF113B
Macaca mulatta
ENSMMUG00000022250
N
0.815
Rnf113a1
Mus musculus
ENSMUSG00000036537
N
0.815
RNF113A
Macaca mulatta
ENSMMUG00000020223
N
0.815
ENSMLUG00000010856
Myotis lucifugus
ENSMLUG00000010856
N
0.815
ENSMGAG00000001753
Meleagris gallopavo
ENSMGAG00000001753
N
0.815
RNF113A
Microcebus murinus
ENSMICG00000001750
N
0.815
Rnf113a1
Rattus norvegicus
ENSRNOG00000034040
N
0.815
RNF113A
Echinops telfairi
ENSETEG00000018346
N
0.815
An02g05190
Aspergillus niger
CADANGAG00002035
N
0.815
XM_538154.2
Canis familiaris
ENSCAFG00000018430
N
0.815
ANIA_07755
Aspergillus nidulans
CADANIAG00000892
N
0.815
LOC518027
Bos taurus
ENSBTAG00000008684
N
0.815
ENSACAG00000012485
Anolis carolinensis
ENSACAG00000012485
N
0.815
R113A_BOVIN
Bos taurus
ENSBTAG00000006034
N
0.815
NP_001027830.1
Ciona intestinalis
ENSCING00000009197
N
0.815
RNF113B
Callithrix jacchus
ENSCJAG00000004501
N
0.815
LOC100058519
Equus caballus
ENSECAG00000003934
N
0.815
ENSECAG00000004638
Equus caballus
ENSECAG00000004638
N
0.815
RNF113A
Dasypus novemcinctus
ENSDNOG00000015321
N
0.815
rnf113a
Danio rerio
ENSDARG00000037930
N
0.815
LOC100388689
Callithrix jacchus
ENSCJAG00000022327
N
0.815
ENSCSAVG00000006210
Ciona savignyi
ENSCSAVG00000006210
N
0.815
amel4_ncbi_hmm8953
Apis mellifera
amel4_ncbi_hmm8953
N
0.815
RNF113A
Gorilla gorilla
ENSGGOG00000002324
N
0.815
RNF113B
Pan troglodytes
ENSPTRG00000005987
N
0.815
ENSPPYG00000005460
Pongo pygmaeus
ENSPPYG00000005460
N
0.815
RNF113A
Otolemur garnettii
ENSOGAG00000016171
N
0.815
VDAG_02435
Verticillium dahliae
VDAG_02435
N
0.815
ENSOANG00000002592
Ornithorhynchus anatinus
ENSOANG00000002592
N
0.815
RNF113A
Procavia capensis
ENSPCAG00000014633
N
0.815
Q67EQ7_ORYLA
Oryzias latipes
ENSORLG00000002442
N
0.815
RNF113A
Oryctolagus cuniculus
ENSOCUG00000016207
N
0.815
RNF113A
Pan troglodytes
ENSPTRG00000022231
N
0.815
ENSPPYG00000020676
Pongo pygmaeus
ENSPPYG00000020676
N
0.815
GF17636
Drosophila ananassae
FBgn0094654
N
0.778
e_gw1.5.501.1
Pleurotus ostreatus
e_gw1.5.501.1
N
0.778
GK22373
Drosophila willistoni
FBgn0067112
N
0.778
GG23724
Drosophila erecta
FBgn0115865
N
0.778
CWC24
Ashbya gossypii
CWC24
N
0.778
GH22886
Drosophila grimshawi
FBgn0130343
N
0.778
GD19337
Drosophila simulans
FBgn0190839
N
0.778
GE25648
Drosophila yakuba
FBgn0242710
N
0.778
AGAP007068
Anopheles gambiae
AGAP007068
N
0.778
GM17684
Drosophila sechellia
FBgn0172592
N
0.778
CMU_031370
Cryptosporidium muris
CMU_031370
N
0.778
GI22714
Drosophila mojavensis
FBgn0145441
N
0.778
GL12088
Drosophila persimilis
FBgn0149696
N
0.778
GA18564-RA
Drosophila pseudoobscura
FBgn0064425
N
0.778
estExt_fgenesh2_pg.C_50080
Agaricus bisporus
estExt_fgenesh2_pg.C_50080
N
0.778
XP_001196290.1
Strongylocentrotus purpuratus
XP_001196290.1
N
0.778
Smp_033590
Schistosoma mansoni
Smp_033590
N
0.778
Bm1_06930
Brugia malayi
Bm1_06930
N
0.778
XP_783481.2
Strongylocentrotus purpuratus
XP_783481.2
N
0.778
CPIJ004936
Culex quinquefasciatus
CPIJ004936
N
0.778
ATEG_08357
Aspergillus terreus
CADATEAG00004925
N
0.778
SAKL0H22880g
Lachancea kluyveri
SAKL0H22880g
N
0.778
XM_537309.2
Canis familiaris
ENSCAFG00000018373
N
0.778
CG4973
Drosophila melanogaster
FBgn0038772
N
0.778
estExt_fgenesh2_kg.C_62064
Serpula lacrymans
estExt_fgenesh2_kg.C_62064
N
0.778
gww2.6.423.1
Phanerochaete chrysosporium
gww2.6.423.1
N
0.778
CpipJ_CPIJ004936
Culex pipiens
CpipJ_CPIJ004936
N
0.778
KLTH0E08580g
Kluyveromyces thermotolerans
KLTH0E08580g
N
0.778
estExt_fgenesh1_pm.C_170027
Phytophthora capsici
estExt_fgenesh1_pm.C_170027
N
0.778
LOAG_01140
Loa loa
LOAG_01140
N
0.778
AAEL001778
Aedes aegypti
AAEL001778
N
0.778
THAPSDRAFT_25179
Thalassiosira pseudonana
Thaps25179
N
0.778
fgenesh1_pg.C_scaffold_13000094
Phytophthora ramorum
fgenesh1_pg.C_scaffold_13000094
N
0.778
4131
Aureococcus anophagefferens
4131
N
0.778
SJAG_03112
Schizosaccharomyces japonicus
SJAG_03112
N
0.778
e_gw1.32.54.1
Fragilariopsis cylindrus
e_gw1.32.54.1
N
0.778
185736
Helobdella robusta
185736
N
0.778
SOCG_00229
Schizosaccharomyces octosporus
SOCG_00229
N
0.778
PHATRDRAFT_12516
Phaeodactylum tricornutum
Phatr12516
N
0.778
SPOG_02814
Schizosaccharomyces cryophilus
SPOG_02814
N
0.778
ENSMLUG00000016812
Myotis lucifugus
ENSMLUG00000016812
N
0.778
UM05163
Ustilago maydis
UM05163
N
0.778
estExt_GeneWisePlus_human.C_50103
Laccaria bicolor
estExt_GeneWisePlus_human.C_50103
N
0.778
WUBG_06682
Wuchereria bancrofti
WUBG_06682
N
0.778
Minc18333
Meloidogyne incognita
Minc18333
N
0.741
fgenesh1_pg.C_Chr_12.0001000110
Ostreococcus tauri
fgenesh1_pg.C_Chr_12.0001000110
N
0.741
cwf24
Schizosaccharomyces pombe
SPBC13E7.02
N
0.741
XM_002892025.1
Arabidopsis lyrata
scaffold_100114.1
N
0.741
CHGG_06589
Chaetomium globosum
CHGG_06589
N
0.741
Aqu1.217710
Amphimedon queenslandica
Aqu1.217710
N
0.741
SPPG_00604
Spizellomyces punctatus
SPPG_00604
N
0.741
CRE04837
Caenorhabditis remanei
CRE04837
N
0.741
CJA02847
Caenorhabditis japonica
CJA02847
N
0.741
CBN12332
Caenorhabditis brenneri
CBN12332
N
0.741
CWC24
Saccharomyces cerevisiae
YLR323C
N
0.741
TP01_0812
Theileria parva
TP01_0812
N
0.741
PMAA_037770
Penicillium marneffei
PMAA_037770
N
0.741
CAOG_06860
Capsaspora owczarzaki
CAOG_06860
N
0.741
estExt_Genewise1Plus.C_21344
Tremella mesenterica
estExt_Genewise1Plus.C_21344
N
0.741
TA05795
Theileria annulata
TA05795
N
0.741
e_gw1.12.147.1
Ostreococcus RCC809
e_gw1.12.147.1
N
0.741
estExt_Genewise1.C_11309
Trichoderma virens
estExt_Genewise1.C_11309
N
0.741
CBG18314
Caenorhabditis briggsae
CBG18314
N
0.741
AT1G01350
Arabidopsis thaliana
AT1G01350-TAIR-G
N
0.741
Ppa-tag-331
Pristionchus pacificus
PPA25510
N
0.741
16613_YLR323C
Saccharomyces bayanus
16613_YLR323C
N
0.741
Skud_Contig756.2
Saccharomyces kudriavzevii
Skud_Contig756.2
N
0.741
gw1.20.96.1
Phycomyces blakesleeanus
gw1.20.96.1
N
0.741
EFA78387.1
Polysphondylium pallidum
EFA78387.1
N
0.741
AT5G06420
Arabidopsis thaliana
AT5G06420-TAIR-G
N
0.741
gw1.2.524.1
Monosiga brevicollis
gw1.2.524.1
N
0.741
ISCW023200
Ixodes scapularis
ISCW023200
N
0.741
rnf-113
Caenorhabditis elegans
K01G5.1
N
0.741
gw1.63.49.1
Postia placenta
gw1.63.49.1
N
0.741
gw1.9.174.1
Postia placenta
gw1.9.174.1
N
0.741
PTSG_02658
Salpingoeca rosetta
PTSG_02658
N
0.741
gwEuk.12.222.1
Ostreococcus lucimarinus
gwEuk.12.222.1
N
0.741
fgenesh2_pg.scaffold_2135000001
Branchiostoma floridae
fgenesh2_pg.scaffold_2135000001
N
0.741
fgenesh2_pm.scaffold_144000004
Branchiostoma floridae
fgenesh2_pm.scaffold_144000004
N
0.741
FOXG_03625
Fusarium oxysporum
FOXG_03625
N
0.741
GJ23438
Drosophila virilis
FBgn0210538
N
0.741
fgeneshDP_pg.C_scaffold_172000011
Dictyostelium purpureum
fgeneshDP_pg.C_scaffold_172000011
N
0.741
PK05761.1
Cannabis sativa
PK05761.1
N
0.704
BRADI3G09570
Brachypodium distachyon
BRADI3G09570
N
0.704
AFLA_061430
Aspergillus flavus
CADAFLAG00006752
N
0.704
UREG_07314
Uncinocarpus reesii
UREG_07314
N
0.704
FGSG_08901
Fusarium graminearum
FGSG_08901
N
0.704
BGIOSIBCE006607
Oryza indica
BGIOSIBCE006607
N
0.704
AO090701000678
Aspergillus oryzae
CADAORAG00010977
N
0.704
Medtr7g132670
Medicago truncatula
Medtr7g132670
N
0.704
e_gw1.2.1336.1
Trichoplax adhaerens
e_gw1.2.1336.1
N
0.704
29733.m000763
Ricinus communis
29733.m000763
N
0.704
estExt_gwp_gw1.C_1140075
Physcomitrella patens
estExt_gwp_gw1.C_1140075
N
0.704
Glyma03g02920.1
Glycine max
Glyma03g02920.1
N
0.704
gw1.1.878.1
Batrachochytrium dendrobatidis
gw1.1.878.1
N
0.704
Glyma05g37520.1
Glycine max
Glyma05g37520.1
N
0.704
29733.m000748
Ricinus communis
29733.m000748
N
0.704
PY01907
Plasmodium yoelii
PY01907
N
0.704
LOC_Os02g19804
Oryza sativa
LOC_Os02g19804
N
0.704
GSVIVG00027082001
Vitis vinifera
GSVIVG00027082001
N
0.704
SB04G009270
Sorghum bicolor
Sb04g009270
N
0.704
PBANKA_130770
Plasmodium berghei
PBANKA_130770
N
0.704
PF14_0416
Plasmodium falciparum
PF14_0416
N
0.704
PCHAS_131090
Plasmodium chabaudi
PCHAS_131090
N
0.704
mgf009866m
Mimulus guttatus
mgf009866m
N
0.704
GRMZM2G373653
Zea mays
GRMZM2G373653
N
0.704
MDP0000202598
Malus x domestica
MDP0000202598
N
0.704
MDP0000182690
Malus x domestica
MDP0000182690
N
0.704
MDP0000274000
Malus x domestica
MDP0000274000
N
0.704
ppa009728m
Prunus persica
ppa009728m
N
0.704
ZYRO0G10956g
Zygosaccharomyces rouxii
ZYRO0G10956g
N
0.704
XP_002490540.1
Pichia pastoris
XP_002490540.1
N
0.704
estExt_fgeneshCV_pg.C_10417
Chlorella vulgaris
estExt_fgeneshCV_pg.C_10417
N
0.704
estExt_fgenesh1_pm.C_10087
Coccomyxa C 169
estExt_fgenesh1_pm.C_10087
N
0.704
Medtr8g068390
Medicago truncatula
Medtr8g068390
N
0.704
Medtr7g132570
Medicago truncatula
Medtr7g132570
N
0.704
15153_YLR323C
Saccharomyces mikatae
15153_YLR323C
N
0.704
15643_YLR323C
Saccharomyces paradoxus
15643_YLR323C
N
0.704
chr1.CM0088.900.nc
Lotus japonicus
chr1.CM0088.900.nc
N
0.704
CAGL0A00935g
Candida glabrata
CAGL0A00935g
N
0.704
rnf113
Dictyostelium discoideum
DDB_G0267870
N
0.704