ENSDORG00000019854 (Dipodomys ordii)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSDORG00000019854 T10137_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000007816 CCHC ZF 5 22
ENSDORP00000007816 CCHC ZF 47 63
ENSDORP00000007816 CCHC ZF 67 84
ENSDORP00000007816 CCHC ZF 91 108
ENSDORP00000007816 CCHC ZF 112 129
ENSDORP00000007816 CCHC ZF 130 147
ENSDORP00000007816 CCHC ZF 151 168

Links

Other CCHC ZF family RBPs
Other Dipodomys ordii RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSDORG00000019792 Dipodomys ordii ENSDORG00000019792 N 0.952
CNBP Spermophilus tridecemlineatus ENSSTOG00000000173 N 0.768
CNBP Taeniopygia guttata ENSTGUG00000004001 N 0.768
CNBP Sorex araneus ENSSARG00000011874 N 0.768
LOC100050146 Equus caballus ENSECAG00000009512 N 0.768
ENSPPYG00000013423 Pongo pygmaeus ENSPPYG00000013423 N 0.768
CNBP Tursiops truncatus ENSTTRG00000015266 N 0.768
cnbp Xenopus tropicalis ENSXETG00000025147 N 0.768
CNBP Cavia porcellus ENSCPOG00000012816 N 0.768
Cnbp Dipodomys ordii ENSDORG00000002919 N 0.768
CNBP Canis familiaris ENSCAFG00000004320 N 0.768
CNBP_BOVIN Bos taurus ENSBTAG00000012159 N 0.768
Ame_R005612 Ailuropoda melanoleuca Ame_R005612 N 0.768
AAI69746 Xenopus laevis AAI69746 N 0.768
CNBP Procavia capensis ENSPCAG00000011572 N 0.768
CNBP Pan troglodytes ENSPTRG00000015369 N 0.768
CNBP Macropus eugenii ENSMEUG00000011699 N 0.768
CNBP Ochotona princeps ENSOPRG00000005487 N 0.768
CNBP Loxodonta africana ENSLAFG00000002502 N 0.768
CNBP Homo sapiens ENSG00000169714 N 0.768
CNBP_CHICK Gallus gallus ENSGALG00000005001 N 0.768
CNBP Myotis lucifugus ENSMLUG00000012554 N 0.768
CNBP Macaca mulatta ENSMMUG00000011585 N 0.768
CNBP Ornithorhynchus anatinus ENSOANG00000000585 N 0.768
CNBP Oryctolagus cuniculus ENSOCUG00000008696 N 0.768
ENSETEG00000008408 Echinops telfairi ENSETEG00000008408 N 0.768
CNBP Felis catus ENSFCAG00000008665 N 0.768
Cnbp Mus musculus ENSMUSG00000030057 N 0.768
CNBP Monodelphis domestica ENSMODG00000008362 N 0.768
A6ML16_CALJA Callithrix jacchus ENSCJAG00000017430 N 0.760
CNBP Anolis carolinensis ENSACAG00000013192 N 0.760
CNBP Vicugna pacos ENSVPAG00000007138 N 0.760
Cnbp Rattus norvegicus ENSRNOG00000010239 N 0.760
CNBP Otolemur garnettii ENSOGAG00000005144 N 0.760
CNBP Tarsius syrichta ENSTSYG00000004344 N 0.760
AAA81168 Xenopus laevis AAA81168 N 0.760
CNBP Gorilla gorilla ENSGGOG00000010085 N 0.760
CAA69031 Xenopus laevis CAA69031 N 0.760
CNBP Pteropus vampyrus ENSPVAG00000015070 N 0.736