ZCCHC13 (Gasterosteus aculeatus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSGACG00000000061 T10194_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000000079 CCHC ZF 7 24
ENSGACP00000000079 CCHC ZF 46 62
ENSGACP00000000079 CCHC ZF 65 82
ENSGACP00000000079 CCHC ZF 89 106
ENSGACP00000000079 CCHC ZF 110 127
ENSGACP00000000079 CCHC ZF 128 140
ENSGACP00000000079 CCHC ZF 149 166
ENSGACP00000000080 CCHC ZF 1 7
ENSGACP00000000080 CCHC ZF 10 27
ENSGACP00000000080 CCHC ZF 34 51
ENSGACP00000000080 CCHC ZF 55 72
ENSGACP00000000080 CCHC ZF 79 96

Links

Other CCHC ZF family RBPs
Other Gasterosteus aculeatus RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.856
zff9 Danio rerio ENSDARG00000045776 N 0.792
ZCCHC13 Tetraodon nigroviridis ENSTNIG00000017940 N 0.768
cnbp Danio rerio ENSDARG00000070922 N 0.744
ZCCHC13 Takifugu rubripes ENSTRUG00000007258 N 0.738