ZCCHC13 (Tetraodon nigroviridis)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSTNIG00000017940 T10526_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000021101 CCHC ZF 7 24
ENSTNIP00000021101 CCHC ZF 43 59
ENSTNIP00000021101 CCHC ZF 62 79
ENSTNIP00000021101 CCHC ZF 86 103
ENSTNIP00000021101 CCHC ZF 107 124
ENSTNIP00000021101 CCHC ZF 125 142
ENSTNIP00000021101 CCHC ZF 146 163

Links

Other CCHC ZF family RBPs
Other Tetraodon nigroviridis RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.840
ZCCHC13 Takifugu rubripes ENSTRUG00000007258 N 0.794
zff9 Danio rerio ENSDARG00000045776 N 0.784
ZCCHC13 Gasterosteus aculeatus ENSGACG00000000061 N 0.768
cnbp Danio rerio ENSDARG00000070922 N 0.760