zff9 (Danio rerio)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSDARG00000045776 T10083_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000067292 CCHC ZF 6 23
ENSDARP00000067292 CCHC ZF 39 55
ENSDARP00000067292 CCHC ZF 58 75
ENSDARP00000067292 CCHC ZF 82 99
ENSDARP00000067292 CCHC ZF 103 120
ENSDARP00000067292 CCHC ZF 121 138
ENSDARP00000067292 CCHC ZF 142 158

Links

Other CCHC ZF family RBPs
Other Danio rerio RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.872
ZCCHC13 Takifugu rubripes ENSTRUG00000007258 N 0.849
cnbp Danio rerio ENSDARG00000070922 N 0.848
ZCCHC13 Gasterosteus aculeatus ENSGACG00000000061 N 0.792
ZCCHC13 Tetraodon nigroviridis ENSTNIG00000017940 N 0.784
CNBP_BOVIN Bos taurus ENSBTAG00000012159 N 0.754
CNBP Procavia capensis ENSPCAG00000011572 N 0.754
CNBP Cavia porcellus ENSCPOG00000012816 N 0.754
CNBP Ochotona princeps ENSOPRG00000005487 N 0.754
CNBP Pan troglodytes ENSPTRG00000015369 N 0.754
CNBP Sorex araneus ENSSARG00000011874 N 0.754
Ame_R005612 Ailuropoda melanoleuca Ame_R005612 N 0.754
CNBP Oryctolagus cuniculus ENSOCUG00000008696 N 0.754
CNBP Canis familiaris ENSCAFG00000004320 N 0.754
CNBP Spermophilus tridecemlineatus ENSSTOG00000000173 N 0.754
CNBP Tursiops truncatus ENSTTRG00000015266 N 0.754
ENSPPYG00000013423 Pongo pygmaeus ENSPPYG00000013423 N 0.754
CNBP Loxodonta africana ENSLAFG00000002502 N 0.754
CNBP Macropus eugenii ENSMEUG00000011699 N 0.754
LOC100050146 Equus caballus ENSECAG00000009512 N 0.754
ENSETEG00000008408 Echinops telfairi ENSETEG00000008408 N 0.754
CNBP Felis catus ENSFCAG00000008665 N 0.754
CNBP Homo sapiens ENSG00000169714 N 0.754
Cnbp Dipodomys ordii ENSDORG00000002919 N 0.754
Cnbp Mus musculus ENSMUSG00000030057 N 0.754
CNBP Ornithorhynchus anatinus ENSOANG00000000585 N 0.754
CNBP Monodelphis domestica ENSMODG00000008362 N 0.754
CNBP Macaca mulatta ENSMMUG00000011585 N 0.754
CNBP Myotis lucifugus ENSMLUG00000012554 N 0.754
cnbp Xenopus tropicalis ENSXETG00000025147 N 0.746
A6ML16_CALJA Callithrix jacchus ENSCJAG00000017430 N 0.746
CNBP Vicugna pacos ENSVPAG00000007138 N 0.746
CNBP_CHICK Gallus gallus ENSGALG00000005001 N 0.746
CNBP Tarsius syrichta ENSTSYG00000004344 N 0.746
CNBP Taeniopygia guttata ENSTGUG00000004001 N 0.746
Cnbp Rattus norvegicus ENSRNOG00000010239 N 0.746
CNBP Otolemur garnettii ENSOGAG00000005144 N 0.746
CNBP Gorilla gorilla ENSGGOG00000010085 N 0.746
AAI69746 Xenopus laevis AAI69746 N 0.738
CNBP Anolis carolinensis ENSACAG00000013192 N 0.738
CAA69031 Xenopus laevis CAA69031 N 0.730
AAA81168 Xenopus laevis AAA81168 N 0.730
CNBP Pteropus vampyrus ENSPVAG00000015070 N 0.722