ZCCHC13 (Takifugu rubripes)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 ENSTRUG00000007258 T10533_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000017902 CCHC ZF 3 20
ENSTRUP00000017902 CCHC ZF 51 68
ENSTRUP00000017902 CCHC ZF 71 88
ENSTRUP00000017902 CCHC ZF 96 111
ENSTRUP00000017902 CCHC ZF 116 133
ENSTRUP00000017902 CCHC ZF 134 151
ENSTRUP00000017902 CCHC ZF 155 172

Links

Other CCHC ZF family RBPs
Other Takifugu rubripes RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
zff9 Danio rerio ENSDARG00000045776 N 0.849
ZCCHC13 Oryzias latipes ENSORLG00000011453 N 0.833
cnbp Danio rerio ENSDARG00000070922 N 0.817
ZCCHC13 Tetraodon nigroviridis ENSTNIG00000017940 N 0.794
ZCCHC13 Gasterosteus aculeatus ENSGACG00000000061 N 0.738
cnbp Xenopus tropicalis ENSXETG00000025147 N 0.730
CNBP Taeniopygia guttata ENSTGUG00000004001 N 0.730
CNBP_CHICK Gallus gallus ENSGALG00000005001 N 0.730
CAA69031 Xenopus laevis CAA69031 N 0.728
CNBP Ornithorhynchus anatinus ENSOANG00000000585 N 0.722
CNBP Myotis lucifugus ENSMLUG00000012554 N 0.722
Cnbp Mus musculus ENSMUSG00000030057 N 0.722
CNBP Monodelphis domestica ENSMODG00000008362 N 0.722
CNBP Oryctolagus cuniculus ENSOCUG00000008696 N 0.722
CNBP Macaca mulatta ENSMMUG00000011585 N 0.722
CNBP Procavia capensis ENSPCAG00000011572 N 0.722
CNBP Spermophilus tridecemlineatus ENSSTOG00000000173 N 0.722
CNBP Tursiops truncatus ENSTTRG00000015266 N 0.722
CNBP Sorex araneus ENSSARG00000011874 N 0.722
CNBP Pan troglodytes ENSPTRG00000015369 N 0.722
CNBP Macropus eugenii ENSMEUG00000011699 N 0.722
ENSPPYG00000013423 Pongo pygmaeus ENSPPYG00000013423 N 0.722
CNBP Ochotona princeps ENSOPRG00000005487 N 0.722
CNBP Loxodonta africana ENSLAFG00000002502 N 0.722
CNBP Canis familiaris ENSCAFG00000004320 N 0.722
CNBP Cavia porcellus ENSCPOG00000012816 N 0.722
CNBP_BOVIN Bos taurus ENSBTAG00000012159 N 0.722
CNBP Anolis carolinensis ENSACAG00000013192 N 0.722
AAI69746 Xenopus laevis AAI69746 N 0.722
Ame_R005612 Ailuropoda melanoleuca Ame_R005612 N 0.722
Cnbp Dipodomys ordii ENSDORG00000002919 N 0.722
LOC100050146 Equus caballus ENSECAG00000009512 N 0.722
CNBP Felis catus ENSFCAG00000008665 N 0.722
CNBP Homo sapiens ENSG00000169714 N 0.722
ENSETEG00000008408 Echinops telfairi ENSETEG00000008408 N 0.722
CNBP Tarsius syrichta ENSTSYG00000004344 N 0.714
CNBP Gorilla gorilla ENSGGOG00000010085 N 0.714
A6ML16_CALJA Callithrix jacchus ENSCJAG00000017430 N 0.714
AAA81168 Xenopus laevis AAA81168 N 0.714
CNBP Vicugna pacos ENSVPAG00000007138 N 0.714
CNBP Otolemur garnettii ENSOGAG00000005144 N 0.714
Cnbp Rattus norvegicus ENSRNOG00000010239 N 0.714