estExt_fgeneshTA2_pg.C_20820 (Trichoplax adhaerens)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 estExt_fgeneshTA2_pg.C_20820 T13656_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgeneshTA2_pg.C_20820 CCHC ZF 171 187

Links

Other CCHC ZF family RBPs
Other Trichoplax adhaerens RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SPBP8B7.15c Schizosaccharomyces pombe SPBP8B7.15c N 0.706
e_gw1.0.2594.1 Selaginella moellendorfii e_gw1.0.2594.1 N 0.706
TESG_06028 Trichophyton tonsurans TESG_06028 N 0.706
TERG_04664 Trichophyton rubrum TERG_04664 N 0.706
SPPG_06553 Spizellomyces punctatus SPPG_06553 N 0.706
TEQG_07175 Trichophyton equinum TEQG_07175 N 0.706
e_gw1.135.14.1 Postia placenta e_gw1.135.14.1 N 0.706
e_gw1.147.34.1 Physcomitrella patens e_gw1.147.34.1 N 0.706
estExt_fgenesh1_pg.C_130086 Sporobolomyces roseus estExt_fgenesh1_pg.C_130086 N 0.706
estExt_fgeneshMC_pg.C_60156 Mucor circinelloides estExt_fgeneshMC_pg.C_60156 N 0.706
e_gwh2.3.362.1 Phanerochaete chrysosporium e_gwh2.3.362.1 N 0.706
e_gw1.84.86.1 Physcomitrella patens e_gw1.84.86.1 N 0.706
e_gw1.311.2.1 Postia placenta e_gw1.311.2.1 N 0.706
RO3G_12479 Rhizopus oryzae RO3G_12479 N 0.706
PITG_10087 Phytophthora infestans PITG_10087 N 0.706
estExt_fgenesh2_pm.C_60269 Heterobasidion annosum estExt_fgenesh2_pm.C_60269 N 0.706
estExt_Genewise1.C_60832 Pleurotus ostreatus estExt_Genewise1.C_60832 N 0.706
s_441997 Phytophthora sojae s_441997 N 0.706
gw1.4.1338.1 Schizophyllum commune gw1.4.1338.1 N 0.706
fgenesh1_pg.C_scaffold_47000011 Phytophthora ramorum fgenesh1_pg.C_scaffold_47000011 N 0.706
fgeneshPB_pg.4__237 Phycomyces blakesleeanus fgeneshPB_pg.4__237 N 0.706
fgeneshTM_pm.1_#_792 Tremella mesenterica fgeneshTM_pm.1_#_792 N 0.706
Genemark.8861_g Serpula lacrymans Genemark.8861_g N 0.706
MCYG_01387 Microsporum canis MCYG_01387 N 0.706
MGYG_01930 Microsporum gypseum MGYG_01930 N 0.706
CPSG_03009 Coccidioides posadasii CPSG_03009 N 0.706
CIMG_04249 Coccidioides immitis CIMG_04249 N 0.706
CC1G_00892 Coprinopsis cinerea CC1G_00892 N 0.706
eu2.Lbscf0002g03430 Laccaria bicolor eu2.Lbscf0002g03430 N 0.706