CSDC2 (Danio rerio)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSDARG00000068477 T16811_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000089829 CSD 77 143

Links

Other CSD family RBPs
Other Danio rerio RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CSDC2 Oryzias latipes ENSORLG00000014166 N 0.853
CSDC2 Tetraodon nigroviridis ENSTNIG00000004955 N 0.838
CSDC2 Oryzias latipes ENSORLG00000002636 N 0.838
CSDC2 Takifugu rubripes ENSTRUG00000017020 N 0.809
CSDC2 Takifugu rubripes ENSTRUG00000004175 N 0.809
CSDC2 Tetraodon nigroviridis ENSTNIG00000012937 N 0.809
CSDC2 Gasterosteus aculeatus ENSGACG00000004665 N 0.809
CSDC2 Gasterosteus aculeatus ENSGACG00000007540 N 0.809
csdc2 Danio rerio ENSDARG00000041323 N 0.809
AAH84399 Xenopus laevis AAH84399 N 0.794
Carhsp1 Rattus norvegicus ENSRNOG00000002610 N 0.779
CARHSP1 Spermophilus tridecemlineatus ENSSTOG00000007008 N 0.779
CARHSP1 Pan troglodytes ENSPTRG00000007749 N 0.779
CARHSP1 Ornithorhynchus anatinus ENSOANG00000008257 N 0.779
Carhsp1 Mus musculus ENSMUSG00000008393 N 0.779
CARHSP1 Ochotona princeps ENSOPRG00000010356 N 0.779
LOC100395892 Callithrix jacchus ENSCJAG00000022227 N 0.779
LOC100410498 Callithrix jacchus ENSCJAG00000017286 N 0.779
Q2NKU4_BOVIN Bos taurus ENSBTAG00000001441 N 0.779
Ame_R007806 Ailuropoda melanoleuca Ame_R007806 N 0.779
CARHSP1 Macaca mulatta ENSMMUG00000021565 N 0.779
CARHSP1 Canis familiaris ENSCAFG00000019003 N 0.779
CARHSP1 Tursiops truncatus ENSTTRG00000014828 N 0.779
CARHSP1 Cavia porcellus ENSCPOG00000025492 N 0.779
LOC100051399 Equus caballus ENSECAG00000019386 N 0.779
CARHSP1 Homo sapiens ENSG00000153048 N 0.779
CARHSP1 Gallus gallus ENSGALG00000007313 N 0.779
CARHSP1 Macropus eugenii ENSMEUG00000016403 N 0.779
ENSMGAG00000008554 Meleagris gallopavo ENSMGAG00000008554 N 0.779
CARHSP1 Gasterosteus aculeatus ENSGACG00000005857 N 0.779
CSDC2 Tursiops truncatus ENSTTRG00000006736 N 0.768
CSDC2 Pteropus vampyrus ENSPVAG00000001165 N 0.768
ENSPPYG00000011873 Pongo pygmaeus ENSPPYG00000011873 N 0.768
CSDC2 Sus scrofa ENSSSCG00000000062 N 0.768
CSDC2 Taeniopygia guttata ENSTGUG00000009898 N 0.768
Csdc2 Dipodomys ordii ENSDORG00000011754 N 0.768
CSDC2 Loxodonta africana ENSLAFG00000027155 N 0.768
CSDC2 Tupaia belangeri ENSTBEG00000011596 N 0.768
CSDC2 Procavia capensis ENSPCAG00000014857 N 0.768
CSDC2 Macropus eugenii ENSMEUG00000002050 N 0.768
Csdc2 Rattus norvegicus ENSRNOG00000005332 N 0.768
Ame_R018068 Ailuropoda melanoleuca Ame_R018068 N 0.768
CSDC2 Cavia porcellus ENSCPOG00000025372 N 0.768
Csdc2 Mus musculus ENSMUSG00000042109 N 0.768
CSDC2 Monodelphis domestica ENSMODG00000016565 N 0.768
CSDC2 Erinaceus europaeus ENSEEUG00000003639 N 0.768
CSDC2 Macaca mulatta ENSMMUG00000001852 N 0.768
CSDC2 Echinops telfairi ENSETEG00000019516 N 0.768
CSDC2 Microcebus murinus ENSMICG00000005978 N 0.768
CSDC2 Ochotona princeps ENSOPRG00000010664 N 0.768
LOC100070658 Equus caballus ENSECAG00000022234 N 0.768
Q08E16_BOVIN Bos taurus ENSBTAG00000004004 N 0.768
CSDC2 Homo sapiens ENSG00000172346 N 0.768
CSDC2 Felis catus ENSFCAG00000003677 N 0.768
carhsp1 Danio rerio ENSDARG00000053129 N 0.765
CARHSP1 Takifugu rubripes ENSTRUG00000010962 N 0.765
CARHSP1 Echinops telfairi ENSETEG00000008180 N 0.765
CARHSP1 Tetraodon nigroviridis ENSTNIG00000011153 N 0.765
CARHSP1 Sus scrofa ENSSSCG00000007911 N 0.765
CARHSP1 Otolemur garnettii ENSOGAG00000014708 N 0.765
CARHSP1 Taeniopygia guttata ENSTGUG00000004665 N 0.765
CARHSP1 Procavia capensis ENSPCAG00000002081 N 0.765
CARHSP1 Microcebus murinus ENSMICG00000006185 N 0.765
XM_001367025.1 Monodelphis domestica ENSMODG00000005721 N 0.765
CARHSP1 Dasypus novemcinctus ENSDNOG00000024912 N 0.765
CARHSP1 Tupaia belangeri ENSTBEG00000005777 N 0.765
CSDC2 Otolemur garnettii ENSOGAG00000002852 N 0.754
CSDC2 Oryctolagus cuniculus ENSOCUG00000006938 N 0.754
CSDC2 Myotis lucifugus ENSMLUG00000002495 N 0.754
LOC100400889 Callithrix jacchus ENSCJAG00000002580 N 0.754
CSDC2 Anolis carolinensis ENSACAG00000004668 N 0.754
CSDC2 Meleagris gallopavo ENSMGAG00000012131 N 0.754
CSDC2 Gallus gallus ENSGALG00000000049 N 0.754
CARHSP1 Myotis lucifugus ENSMLUG00000009734 N 0.750
CARHSP1 Pteropus vampyrus ENSPVAG00000003125 N 0.750
ENSPPYG00000007085 Pongo pygmaeus ENSPPYG00000007085 N 0.735
XM_001363201.1 Monodelphis domestica ENSMODG00000024949 N 0.735
CARHSP1 Felis catus ENSFCAG00000003289 N 0.735
CARHSP1 Loxodonta africana ENSLAFG00000022498 N 0.721