CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GM15930
(
Drosophila sechellia
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0170846
T19941_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0197407
KH
234
285
PKFNFAGKILGPKGNSLRRLQEESQCKIAIKGRSSIRDRNKEEQLRSSGDRR
Links
Other
KH
family RBPs
Other
Drosophila sechellia
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GD11626
Drosophila simulans
FBgn0183366
N
0.846
GM15922
Drosophila sechellia
FBgn0170838
N
0.825
GD11683
Drosophila simulans
FBgn0183423
N
0.823
CG3927
Drosophila melanogaster
FBgn0034739
N
0.786
GA17537-RA
Drosophila pseudoobscura
FBgn0077548
N
0.762
GK20825
Drosophila willistoni
FBgn0222821
N
0.750
GD25131
Drosophila simulans
FBgn0196443
N
0.750
GM15642
Drosophila sechellia
FBgn0170560
N
0.750
GF13022
Drosophila ananassae
FBgn0090055
N
0.750
qkr58E-3
Drosophila melanogaster
FBgn0022984
N
0.750
GE11681
Drosophila yakuba
FBgn0229475
N
0.750
CG4021
Drosophila melanogaster
FBgn0034659
N
0.750
GI18981
Drosophila mojavensis
FBgn0141720
N
0.734
GM15865
Drosophila sechellia
FBgn0170781
N
0.721
GH20535
Drosophila grimshawi
FBgn0127998
N
0.719
GG20697
Drosophila erecta
FBgn0112884
N
0.719
GJ19943
Drosophila virilis
FBgn0207085
N
0.719