CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PHUM590060
(
Pediculus humanus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
PHUM590060
T20188_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM590060-PA
KH
140
190
KRRQRIIGPGGCTLKSIELLTNCYVLVQGQTVAALGPYKGLMEVRSIVEKT
Links
Other
KH
family RBPs
Other
Pediculus humanus
RBPs
15 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm386444
Nasonia vitripennis
nasonia_NCBI_hmm386444
N
0.786
DGIL_AUG5s1009g5t1
Acyrtosiphon pisum
DGIL_AUG5s1009g5t1
N
0.754
amel4_ncbi_hmm4445
Apis mellifera
amel4_ncbi_hmm4445
N
0.741
GL18627
Drosophila persimilis
FBgn0156228
N
0.736
GI18007
Drosophila mojavensis
FBgn0140747
N
0.736
GJ19628
Drosophila virilis
FBgn0206770
N
0.736
GE15854
Drosophila yakuba
FBgn0233416
N
0.736
GG24622
Drosophila erecta
FBgn0116754
N
0.736
GK24616
Drosophila willistoni
FBgn0226576
N
0.736
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.736
dbe
Drosophila melanogaster
FBgn0020305
N
0.736
estExt_fgenesh2_kg.C_20554
Agaricus bisporus
estExt_fgenesh2_kg.C_20554
N
0.717
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.717
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.717
GF14827
Drosophila ananassae
FBgn0091854
N
0.707