CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GF14827
(
Drosophila ananassae
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FBgn0091854
T19833_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0118019
KH
139
196
FVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVAALGPYKGLQQVRDIVVETMNNVH
Links
Other
KH
family RBPs
Other
Drosophila ananassae
RBPs
18 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.845
GG24622
Drosophila erecta
FBgn0116754
N
0.845
dbe
Drosophila melanogaster
FBgn0020305
N
0.845
GK24616
Drosophila willistoni
FBgn0226576
N
0.845
GE15854
Drosophila yakuba
FBgn0233416
N
0.845
GI18007
Drosophila mojavensis
FBgn0140747
N
0.845
GJ19628
Drosophila virilis
FBgn0206770
N
0.845
GL18627
Drosophila persimilis
FBgn0156228
N
0.845
nasonia_NCBI_hmm386444
Nasonia vitripennis
nasonia_NCBI_hmm386444
N
0.828
DGIL_AUG5s1009g5t1
Acyrtosiphon pisum
DGIL_AUG5s1009g5t1
N
0.810
amel4_ncbi_hmm4445
Apis mellifera
amel4_ncbi_hmm4445
N
0.776
85673
Helobdella robusta
85673
N
0.776
PASA_GEN_0400107
Daphnia pulex
PASA_GEN_0400107
N
0.741
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.724
KRR1
Oryzias latipes
ENSORLG00000019616
N
0.707
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.707
PHUM590060
Pediculus humanus
PHUM590060
N
0.707
estExt_Genewise1Plus.C_20041
Sporobolomyces roseus
estExt_Genewise1Plus.C_20041
N
0.707