CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
nasonia_NCBI_hmm386444
(
Nasonia vitripennis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
nasonia_NCBI_hmm386444
T18034_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm386444
KH
138
193
FVKRRQRLIGPNGCTLKSIELLTNCYVLVQGQTVAALGPYKGLQQVRRIAEDTMKN
Links
Other
KH
family RBPs
Other
Nasonia vitripennis
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DGIL_AUG5s1009g5t1
Acyrtosiphon pisum
DGIL_AUG5s1009g5t1
N
0.895
amel4_ncbi_hmm4445
Apis mellifera
amel4_ncbi_hmm4445
N
0.862
GF14827
Drosophila ananassae
FBgn0091854
N
0.828
PASA_GEN_0400107
Daphnia pulex
PASA_GEN_0400107
N
0.789
GE15854
Drosophila yakuba
FBgn0233416
N
0.786
PHUM590060
Pediculus humanus
PHUM590060
N
0.786
GK24616
Drosophila willistoni
FBgn0226576
N
0.786
GJ19628
Drosophila virilis
FBgn0206770
N
0.786
dbe
Drosophila melanogaster
FBgn0020305
N
0.786
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.786
GG24622
Drosophila erecta
FBgn0116754
N
0.786
GI18007
Drosophila mojavensis
FBgn0140747
N
0.786
GL18627
Drosophila persimilis
FBgn0156228
N
0.786
KRR1
Oryzias latipes
ENSORLG00000019616
N
0.750
AGAP007912
Anopheles gambiae
AGAP007912
N
0.732
estExt_Genewise1Plus.C_20041
Sporobolomyces roseus
estExt_Genewise1Plus.C_20041
N
0.719
85673
Helobdella robusta
85673
N
0.707