CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DGIL_AUG5s1009g5t1
(
Acyrtosiphon pisum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
DGIL_AUG5s1009g5t1
T17997_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DGIL_AUG5s1009g5t1
KH
124
180
FVKRRQRLIGPGGCTLKSIELLTNCYMLVQGQTVAALGPFKGLQQVRRIVTDTMKNV
Links
Other
KH
family RBPs
Other
Acyrtosiphon pisum
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm386444
Nasonia vitripennis
nasonia_NCBI_hmm386444
N
0.895
amel4_ncbi_hmm4445
Apis mellifera
amel4_ncbi_hmm4445
N
0.828
GF14827
Drosophila ananassae
FBgn0091854
N
0.810
PHUM590060
Pediculus humanus
PHUM590060
N
0.754
PASA_GEN_0400107
Daphnia pulex
PASA_GEN_0400107
N
0.754
GE15854
Drosophila yakuba
FBgn0233416
N
0.737
estExt_Genewise1Plus.C_20041
Sporobolomyces roseus
estExt_Genewise1Plus.C_20041
N
0.737
GK24616
Drosophila willistoni
FBgn0226576
N
0.737
GL18627
Drosophila persimilis
FBgn0156228
N
0.737
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.737
dbe
Drosophila melanogaster
FBgn0020305
N
0.737
GJ19628
Drosophila virilis
FBgn0206770
N
0.737
GG24622
Drosophila erecta
FBgn0116754
N
0.737
GI18007
Drosophila mojavensis
FBgn0140747
N
0.737
KRR1
Oryzias latipes
ENSORLG00000019616
N
0.719
85673
Helobdella robusta
85673
N
0.707