CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PVX_117000
(
Plasmodium vivax
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
PVX_117000
T20450_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PVX_117000
KH
188
237
LSRCIGRICGSNGATKYAIENATKTRIVIAGDKIHILGSFNNIKMARYSI
Links
Other
KH
family RBPs
Other
Plasmodium vivax
RBPs
62 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PKH_123590
Plasmodium knowlesi
PKH_123590
N
1.000
PCHAS_133710
Plasmodium chabaudi
PCHAS_133710
N
0.980
PY03646
Plasmodium yoelii
PY03646
N
0.980
PBANKA_133250
Plasmodium berghei
PBANKA_133250
N
0.980
PF14_0661
Plasmodium falciparum
PF14_0661
N
0.940
28525.m000262
Ricinus communis
28525.m000262
N
0.740
cassava30594.valid.m1
Manihot esculenta
cassava30594.valid.m1
N
0.740
ppa009897m
Prunus persica
ppa009897m
N
0.740
ppa011086m
Prunus persica
ppa011086m
N
0.740
B9N5M8_POPTR
Populus trichocarpa
POPTR_0011s16880
N
0.740
EDO07242.1
Babesia bovis
EDO07242.1
N
0.740
MDP0000136407
Malus x domestica
MDP0000136407
N
0.740
MDP0000265633
Malus x domestica
MDP0000265633
N
0.740
estExt_Genewise1Plus.C_10659
Myceliophthora thermophila
estExt_Genewise1Plus.C_10659
N
0.740
MDP0000120063
Malus x domestica
MDP0000120063
N
0.740
Cucsa.041830
Cucumis sativus
Cucsa.041830
N
0.740
B9GHH7_POPTR
Populus trichocarpa
POPTR_0001s47320
N
0.740
MDP0000754021
Malus x domestica
MDP0000754021
N
0.740
PK08146.1
Cannabis sativa
PK08146.1
N
0.740
Cucsa.201760
Cucumis sativus
Cucsa.201760
N
0.740
LOC_Os01g57910
Oryza sativa
LOC_Os01g57910
N
0.720
BRADI2G52180
Brachypodium distachyon
BRADI2G52180
N
0.720
BGIOSIBCE009391
Oryza indica
BGIOSIBCE009391
N
0.720
Q6VBQ6_ORYLA
Oryzias latipes
ENSORLG00000002371
N
0.720
LOC_Os03g02420
Oryza sativa
LOC_Os03g02420
N
0.720
PHUM356890
Pediculus humanus
PHUM356890
N
0.720
estExt_Genewise1.C_10689
Thielavia terrestris
estExt_Genewise1.C_10689
N
0.720
LjSGA_017760.2
Lotus japonicus
LjSGA_017760.2
N
0.720
Glyma08g44800.1
Glycine max
Glyma08g44800.1
N
0.720
Glyma18g08080.1
Glycine max
Glyma18g08080.1
N
0.720
cassava7030.valid.m1
Manihot esculenta
cassava7030.valid.m1
N
0.720
Glyma18g08100.1
Glycine max
Glyma18g08100.1
N
0.720
pno1
Danio rerio
ENSDARG00000008502
N
0.720
SB03G036840
Sorghum bicolor
Sb03g036840
N
0.720
GRMZM2G139198
Zea mays
GRMZM2G139198
N
0.720
GRMZM2G085005
Zea mays
GRMZM2G085005
N
0.720
PNO1
Gasterosteus aculeatus
ENSGACG00000012047
N
0.700
PNO1_CHICK
Gallus gallus
ENSGALG00000009093
N
0.700
PNO1
Tetraodon nigroviridis
ENSTNIG00000009825
N
0.700
pno1
Xenopus tropicalis
ENSXETG00000017349
N
0.700
PNO1
Takifugu rubripes
ENSTRUG00000012470
N
0.700
PNO1
Taeniopygia guttata
ENSTGUG00000002369
N
0.700
PNO1
Meleagris gallopavo
ENSMGAG00000004514
N
0.700
TP01_0887
Theileria parva
TP01_0887
N
0.700
estExt_fgenesh1_pg.C_190237
Phytophthora capsici
estExt_fgenesh1_pg.C_190237
N
0.700
GSPATP00020703001
Paramecium tetraurelia
GSPATP00020703001
N
0.700
GSPATP00021981001
Paramecium tetraurelia
GSPATP00021981001
N
0.700
Medtr3g080390
Medicago truncatula
Medtr3g080390
N
0.700
s_468317
Phytophthora sojae
s_468317
N
0.700
fgenesh1_pm.C_scaffold_5000030
Phytophthora ramorum
fgenesh1_pm.C_scaffold_5000030
N
0.700
fgeneshTA2_pg.C_scaffold_14000176
Trichoplax adhaerens
fgeneshTA2_pg.C_scaffold_14000176
N
0.700
mgf006621m
Mimulus guttatus
mgf006621m
N
0.700
TA06215
Theileria annulata
TA06215
N
0.700
XP_001202155.1
Strongylocentrotus purpuratus
XP_001202155.1
N
0.700
AAQ24169
Xenopus laevis
AAQ24169
N
0.700
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.700
PITG_01680
Phytophthora infestans
PITG_01680
N
0.700
AAH42279
Xenopus laevis
AAH42279
N
0.700
XP_798188.2
Strongylocentrotus purpuratus
XP_798188.2
N
0.700
XP_001202160.1
Strongylocentrotus purpuratus
XP_001202160.1
N
0.700
XP_791733.2
Strongylocentrotus purpuratus
XP_791733.2
N
0.700
SPRG_02415
Saprolegnia parasitica
SPRG_02415
N
0.700