estExt_GeneWisePlus.C_20165 (Trichoderma reesei)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_GeneWisePlus.C_20165 T20992_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_GeneWisePlus.C_20165 KH 262 333
estExt_GeneWisePlus.C_20165 KH 436 471
estExt_GeneWisePlus.C_20165 KH 484 545
estExt_GeneWisePlus.C_20165 KH 553 624
estExt_GeneWisePlus.C_20165 KH 641 697

Links

Other KH family RBPs
Other Trichoderma reesei RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.2.59.1 Trichoderma atroviride e_gw1.2.59.1 N 0.911
FVEG_06144 Fusarium verticillioides FVEG_06144 N 0.887
FOXG_08528 Fusarium oxysporum FOXG_08528 N 0.887
FGSG_06181 Fusarium graminearum FGSG_06181 N 0.887
fgenesh1_pg.00866_#_126 Aspergillus carbonarius fgenesh1_pg.00866_#_126 N 0.729
ATEG_01323 Aspergillus terreus CADATEAG00002653 N 0.726
Pc12g11760 Penicillium chrysogenum Pc12g11760 N 0.724
e_gw1.1.3735.1 Myceliophthora thermophila e_gw1.1.3735.1 N 0.720
HCAG_05999 Histoplasma capsulatum HCAG_05999 N 0.717
MCYG_03492 Microsporum canis MCYG_03492 N 0.706
estExt_Genewise1Plus.C_210177 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_210177 N 0.700