CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MCYG_03492
(
Microsporum canis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
MCYG_03492
T17715_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_03492T0
KH
332
403
VKLELSTHFLVCGRTRKNIKMIEAATNTAIYFPPPFPRVYGYMPPGATRRCEDEVYITGMNQDDINLVKQKL
MCYG_03492T0
KH
506
542
TMLSDICANSGADVTFDKLTFHIHGSDDSVKAAMMVI
MCYG_03492T0
KH
556
617
KVKIELANEHKEFVSGKKNGKINKIMSQRNVQIIFDGFNEYNFYIDVCANDYEAVKQGLHLV
MCYG_03492T0
KH
624
697
SISFHVPDQYHKRIIGIGGQHIQRVMKKYSVFVKFSNAMDRGGAGKDDDDIRVENVICRTPARNAQNLELVKQE
MCYG_03492T0
KH
711
770
SETVVVNRLYHRELIARMKEIDELEKKWNCKIDFPSTETASDFVTISGPEYQVPQAVDAF
Links
Other
KH
family RBPs
Other
Microsporum canis
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TERG_04920
Trichophyton rubrum
TERG_04920
N
0.908
TESG_05929
Trichophyton tonsurans
TESG_05929
N
0.908
MGYG_03096
Microsporum gypseum
MGYG_03096
N
0.905
TEQG_01206
Trichophyton equinum
TEQG_01206
N
0.896
UREG_06534
Uncinocarpus reesii
UREG_06534
N
0.870
fgenesh1_pg.00866_#_126
Aspergillus carbonarius
fgenesh1_pg.00866_#_126
N
0.824
HCAG_05999
Histoplasma capsulatum
HCAG_05999
N
0.818
ATEG_01323
Aspergillus terreus
CADATEAG00002653
N
0.814
Pc12g11760
Penicillium chrysogenum
Pc12g11760
N
0.790
BDBG_03236
Blastomyces dermatitidis
BDBG_03236
N
0.785
ACLA_074000
Aspergillus clavatus
CADACLAG00007261
N
0.770
estExt_Genewise1Plus.C_210177
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_210177
N
0.761
PABG_06460
Paracoccidioides brasiliensis
PABG_06460
N
0.760
estExt_Genewise1Plus.C_140444
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_140444
N
0.740
FVEG_06144
Fusarium verticillioides
FVEG_06144
N
0.719
FOXG_08528
Fusarium oxysporum
FOXG_08528
N
0.719
e_gw1.2.59.1
Trichoderma atroviride
e_gw1.2.59.1
N
0.718
FGSG_06181
Fusarium graminearum
FGSG_06181
N
0.709
estExt_GeneWisePlus.C_20165
Trichoderma reesei
estExt_GeneWisePlus.C_20165
N
0.706