CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP4B
(
Danio rerio
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSDARG00000062146
T22723_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000083939
La
148
205
LKATLEFCLSRENLANDMYLISQMDSDQYVPIVTLANLDQIKKLTTDVDLISDILKTL
Links
Other
La
family RBPs
Other
Danio rerio
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP4B
Oryzias latipes
ENSORLG00000006080
N
0.862
LARP4B
Gasterosteus aculeatus
ENSGACG00000017535
N
0.828
LARP4B
Tarsius syrichta
ENSTSYG00000002568
N
0.810
LARP4B
Ochotona princeps
ENSOPRG00000003300
N
0.810
Larp4b
Mus musculus
ENSMUSG00000033499
N
0.810
ENSPPYG00000002035
Pongo pygmaeus
ENSPPYG00000002035
N
0.810
LARP4B
Dasypus novemcinctus
ENSDNOG00000002462
N
0.810
LARP4B
Tetraodon nigroviridis
ENSTNIG00000004571
N
0.810
Larp5
Rattus norvegicus
ENSRNOG00000015888
N
0.810
LARP4B
Macaca mulatta
ENSMMUG00000005279
N
0.810
LARP4B
Tetraodon nigroviridis
ENSTNIG00000007991
N
0.810
LARP4B
Pan troglodytes
ENSPTRG00000002235
N
0.810
LARP4B
Echinops telfairi
ENSETEG00000011249
N
0.810
LARP4B
Homo sapiens
ENSG00000107929
N
0.810
LARP4B
Loxodonta africana
ENSLAFG00000015334
N
0.810
LARP4B
Gorilla gorilla
ENSGGOG00000003572
N
0.797
LARP4B
Oryctolagus cuniculus
ENSOCUG00000004950
N
0.797
LARP4B
Monodelphis domestica
ENSMODG00000005957
N
0.793
LARP4B
Spermophilus tridecemlineatus
ENSSTOG00000000587
N
0.793
larp4b
Xenopus tropicalis
ENSXETG00000016882
N
0.793
LARP4B
Erinaceus europaeus
ENSEEUG00000008391
N
0.793
LARP4B
Sus scrofa
ENSSSCG00000011162
N
0.793
LARP4B
Tursiops truncatus
ENSTTRG00000011151
N
0.793
LARP4B
Myotis lucifugus
ENSMLUG00000005880
N
0.793
LARP4B
Choloepus hoffmanni
ENSCHOG00000007831
N
0.793
LARP4B
Bos taurus
ENSBTAG00000013899
N
0.793
LARP4B
Sorex araneus
ENSSARG00000001243
N
0.793
LOC100057616
Equus caballus
ENSECAG00000024040
N
0.793
LARP4B
Cavia porcellus
ENSCPOG00000009375
N
0.780
LARP4B
Anolis carolinensis
ENSACAG00000002858
N
0.776
LARP5
Taeniopygia guttata
ENSTGUG00000000811
N
0.776
LARP5
Gallus gallus
ENSGALG00000006672
N
0.776
LARP4B
Meleagris gallopavo
ENSMGAG00000005472
N
0.776
ENSTGUG00000013982
Taeniopygia guttata
ENSTGUG00000013982
N
0.776
LARP4B
Ornithorhynchus anatinus
ENSOANG00000006100
N
0.763
LARP4B
Canis familiaris
ENSCAFG00000005546
N
0.759
Ame_R012731
Ailuropoda melanoleuca
Ame_R012731
N
0.759
LARP4B
Vicugna pacos
ENSVPAG00000000128
N
0.724
LARP4B
Pteropus vampyrus
ENSPVAG00000009784
N
0.707