LARP4B (Tetraodon nigroviridis)
La

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La) IPR006630 ENSTNIG00000007991 T22868_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000002135 La 153 208
ENSTNIP00000010812 La 159 214
ENSTNIP00000010813 La 171 226

Links

Other La family RBPs
Other Tetraodon nigroviridis RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LARP4B Tetraodon nigroviridis ENSTNIG00000004571 N 1.000
LARP4B Gasterosteus aculeatus ENSGACG00000017535 N 0.948
LARP4B Oryzias latipes ENSORLG00000006080 N 0.931
LARP5 Gallus gallus ENSGALG00000006672 N 0.862
LARP4B Echinops telfairi ENSETEG00000011249 N 0.862
LARP4B Homo sapiens ENSG00000107929 N 0.862
LARP4B Loxodonta africana ENSLAFG00000015334 N 0.862
Larp4b Mus musculus ENSMUSG00000033499 N 0.862
LARP4B Macaca mulatta ENSMMUG00000005279 N 0.862
LARP4B Ochotona princeps ENSOPRG00000003300 N 0.862
LARP4B Meleagris gallopavo ENSMGAG00000005472 N 0.862
ENSPPYG00000002035 Pongo pygmaeus ENSPPYG00000002035 N 0.862
LARP4B Dasypus novemcinctus ENSDNOG00000002462 N 0.862
Ame_R012731 Ailuropoda melanoleuca Ame_R012731 N 0.862
larp4b Xenopus tropicalis ENSXETG00000016882 N 0.862
ENSTGUG00000013982 Taeniopygia guttata ENSTGUG00000013982 N 0.862
LARP4B Tarsius syrichta ENSTSYG00000002568 N 0.862
LARP4B Anolis carolinensis ENSACAG00000002858 N 0.862
LARP5 Taeniopygia guttata ENSTGUG00000000811 N 0.862
LARP4B Pan troglodytes ENSPTRG00000002235 N 0.862
Larp5 Rattus norvegicus ENSRNOG00000015888 N 0.862
LARP4B Choloepus hoffmanni ENSCHOG00000007831 N 0.862
LARP4B Canis familiaris ENSCAFG00000005546 N 0.862
LARP4B Oryctolagus cuniculus ENSOCUG00000004950 N 0.847
LARP4B Ornithorhynchus anatinus ENSOANG00000006100 N 0.847
LARP4B Gorilla gorilla ENSGGOG00000003572 N 0.847
LARP4B Monodelphis domestica ENSMODG00000005957 N 0.845
LARP4B Sorex araneus ENSSARG00000001243 N 0.845
LARP4B Sus scrofa ENSSSCG00000011162 N 0.845
LARP4B Bos taurus ENSBTAG00000013899 N 0.845
LARP4B Tursiops truncatus ENSTTRG00000011151 N 0.845
LARP4B Myotis lucifugus ENSMLUG00000005880 N 0.845
LARP4B Erinaceus europaeus ENSEEUG00000008391 N 0.845
LOC100057616 Equus caballus ENSECAG00000024040 N 0.845
LARP4B Spermophilus tridecemlineatus ENSSTOG00000000587 N 0.845
LARP4B Cavia porcellus ENSCPOG00000009375 N 0.831
LARP4B Danio rerio ENSDARG00000062146 N 0.810
LARP4B Pteropus vampyrus ENSPVAG00000009784 N 0.793
LARP4B Vicugna pacos ENSVPAG00000000128 N 0.776