CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP4B
(
Ornithorhynchus anatinus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSOANG00000006100
T22805_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000009729
La
169
227
LKKTLEFCLSSRENLASDMYLISQMDSDQYVPIITVANLDHVKKLSTDMDLIVEVLRSL
ENSOANP00000009730
La
166
224
LKKTLEFCLSSRENLASDMYLISQMDSDQYVPIITVANLDHVKKLSTDMDLIVEVLRSL
ENSOANP00000009732
La
169
227
LKKTLEFCLSSRENLASDMYLISQMDSDQYVPIITVANLDHVKKLSTDMDLIVEVLRSL
Links
Other
La
family RBPs
Other
Ornithorhynchus anatinus
RBPs
63 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP5
Gallus gallus
ENSGALG00000006672
N
0.966
LARP4B
Cavia porcellus
ENSCPOG00000009375
N
0.966
ENSTGUG00000013982
Taeniopygia guttata
ENSTGUG00000013982
N
0.966
LARP5
Taeniopygia guttata
ENSTGUG00000000811
N
0.966
LARP4B
Meleagris gallopavo
ENSMGAG00000005472
N
0.966
Ame_R012731
Ailuropoda melanoleuca
Ame_R012731
N
0.949
LARP4B
Anolis carolinensis
ENSACAG00000002858
N
0.949
LOC100057616
Equus caballus
ENSECAG00000024040
N
0.949
LARP4B
Loxodonta africana
ENSLAFG00000015334
N
0.949
LARP4B
Gorilla gorilla
ENSGGOG00000003572
N
0.949
LARP4B
Erinaceus europaeus
ENSEEUG00000008391
N
0.949
LARP4B
Sus scrofa
ENSSSCG00000011162
N
0.949
LARP4B
Canis familiaris
ENSCAFG00000005546
N
0.949
LARP4B
Bos taurus
ENSBTAG00000013899
N
0.949
LARP4B
Sorex araneus
ENSSARG00000001243
N
0.949
LARP4B
Oryctolagus cuniculus
ENSOCUG00000004950
N
0.949
LARP4B
Ochotona princeps
ENSOPRG00000003300
N
0.932
ENSPPYG00000002035
Pongo pygmaeus
ENSPPYG00000002035
N
0.932
LARP4B
Homo sapiens
ENSG00000107929
N
0.932
LARP4B
Pan troglodytes
ENSPTRG00000002235
N
0.932
LARP4B
Echinops telfairi
ENSETEG00000011249
N
0.932
LARP4B
Dasypus novemcinctus
ENSDNOG00000002462
N
0.932
larp4b
Xenopus tropicalis
ENSXETG00000016882
N
0.932
Larp5
Rattus norvegicus
ENSRNOG00000015888
N
0.932
Larp4b
Mus musculus
ENSMUSG00000033499
N
0.932
LARP4B
Monodelphis domestica
ENSMODG00000005957
N
0.932
LARP4B
Tarsius syrichta
ENSTSYG00000002568
N
0.932
LARP4B
Macaca mulatta
ENSMMUG00000005279
N
0.932
LARP4B
Tursiops truncatus
ENSTTRG00000011151
N
0.932
LARP4B
Myotis lucifugus
ENSMLUG00000005880
N
0.932
LARP4B
Spermophilus tridecemlineatus
ENSSTOG00000000587
N
0.915
LARP4B
Choloepus hoffmanni
ENSCHOG00000007831
N
0.898
LARP4B
Gasterosteus aculeatus
ENSGACG00000017535
N
0.898
LARP4B
Vicugna pacos
ENSVPAG00000000128
N
0.881
LARP4B
Oryzias latipes
ENSORLG00000006080
N
0.864
LARP4B
Tetraodon nigroviridis
ENSTNIG00000007991
N
0.847
LARP4B
Tetraodon nigroviridis
ENSTNIG00000004571
N
0.847
LARP4B
Pteropus vampyrus
ENSPVAG00000009784
N
0.831
LARP4B
Felis catus
ENSFCAG00000000721
N
0.763
LARP4B
Danio rerio
ENSDARG00000062146
N
0.763
LARP4
Procavia capensis
ENSPCAG00000003671
N
0.729
ENSCPOG00000020519
Cavia porcellus
ENSCPOG00000020519
N
0.729
A7MB26_BOVIN
Bos taurus
ENSBTAG00000017164
N
0.729
LARP4
Tarsius syrichta
ENSTSYG00000004342
N
0.712
LARP4
Tursiops truncatus
ENSTTRG00000003764
N
0.712
Ame_R010643
Ailuropoda melanoleuca
Ame_R010643
N
0.712
LOC693337
Macaca mulatta
ENSMMUG00000008172
N
0.712
LARP4
Sorex araneus
ENSSARG00000012469
N
0.712
LARP4
Ornithorhynchus anatinus
ENSOANG00000004373
N
0.712
LARP4
Tupaia belangeri
ENSTBEG00000005167
N
0.712
Larp4
Mus musculus
ENSMUSG00000023025
N
0.712
LARP4B
Macropus eugenii
ENSMEUG00000013114
N
0.712
LARP4
Loxodonta africana
ENSLAFG00000005160
N
0.712
LARP4
Canis familiaris
ENSCAFG00000008174
N
0.712
LARP4
Callithrix jacchus
ENSCJAG00000021131
N
0.712
LARP4
Equus caballus
ENSECAG00000012479
N
0.712
LARP4
Homo sapiens
ENSG00000161813
N
0.712
XR_019868.1
Pan troglodytes
ENSPTRG00000004935
N
0.712
ENSPPYG00000004512
Pongo pygmaeus
ENSPPYG00000004512
N
0.712
LARP4
Gorilla gorilla
ENSGGOG00000015230
N
0.712
LARP4
Pteropus vampyrus
ENSPVAG00000016840
N
0.712
AAI24888
Xenopus laevis
AAI24888
N
0.712