CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP4B
(
Cavia porcellus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSCPOG00000009375
T22709_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000008417
La
160
218
LKKTLEFCLSSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDMDLIVEVLRSL
Links
Other
La
family RBPs
Other
Cavia porcellus
RBPs
71 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP4B
Sorex araneus
ENSSARG00000001243
N
0.983
LARP4B
Gorilla gorilla
ENSGGOG00000003572
N
0.983
LARP4B
Oryctolagus cuniculus
ENSOCUG00000004950
N
0.983
LARP4B
Erinaceus europaeus
ENSEEUG00000008391
N
0.983
LOC100057616
Equus caballus
ENSECAG00000024040
N
0.983
LARP4B
Bos taurus
ENSBTAG00000013899
N
0.983
LARP4B
Loxodonta africana
ENSLAFG00000015334
N
0.983
LARP4B
Sus scrofa
ENSSSCG00000011162
N
0.983
LARP4B
Macaca mulatta
ENSMMUG00000005279
N
0.966
LARP4B
Monodelphis domestica
ENSMODG00000005957
N
0.966
LARP4B
Ornithorhynchus anatinus
ENSOANG00000006100
N
0.966
Larp4b
Mus musculus
ENSMUSG00000033499
N
0.966
Larp5
Rattus norvegicus
ENSRNOG00000015888
N
0.966
LARP4B
Tursiops truncatus
ENSTTRG00000011151
N
0.966
LARP4B
Tarsius syrichta
ENSTSYG00000002568
N
0.966
LARP4B
Myotis lucifugus
ENSMLUG00000005880
N
0.966
LARP4B
Pan troglodytes
ENSPTRG00000002235
N
0.966
LARP4B
Ochotona princeps
ENSOPRG00000003300
N
0.966
ENSPPYG00000002035
Pongo pygmaeus
ENSPPYG00000002035
N
0.966
LARP4B
Dasypus novemcinctus
ENSDNOG00000002462
N
0.966
LARP4B
Echinops telfairi
ENSETEG00000011249
N
0.966
LARP4B
Homo sapiens
ENSG00000107929
N
0.966
LARP5
Gallus gallus
ENSGALG00000006672
N
0.949
LARP4B
Meleagris gallopavo
ENSMGAG00000005472
N
0.949
Ame_R012731
Ailuropoda melanoleuca
Ame_R012731
N
0.949
LARP4B
Canis familiaris
ENSCAFG00000005546
N
0.949
ENSTGUG00000013982
Taeniopygia guttata
ENSTGUG00000013982
N
0.949
LARP5
Taeniopygia guttata
ENSTGUG00000000811
N
0.949
LARP4B
Spermophilus tridecemlineatus
ENSSTOG00000000587
N
0.949
LARP4B
Anolis carolinensis
ENSACAG00000002858
N
0.932
LARP4B
Choloepus hoffmanni
ENSCHOG00000007831
N
0.932
LARP4B
Vicugna pacos
ENSVPAG00000000128
N
0.915
larp4b
Xenopus tropicalis
ENSXETG00000016882
N
0.915
LARP4B
Gasterosteus aculeatus
ENSGACG00000017535
N
0.881
LARP4B
Oryzias latipes
ENSORLG00000006080
N
0.881
LARP4B
Tetraodon nigroviridis
ENSTNIG00000007991
N
0.831
LARP4B
Tetraodon nigroviridis
ENSTNIG00000004571
N
0.831
LARP4B
Pteropus vampyrus
ENSPVAG00000009784
N
0.831
LARP4B
Danio rerio
ENSDARG00000062146
N
0.780
LARP4B
Felis catus
ENSFCAG00000000721
N
0.763
LARP4
Procavia capensis
ENSPCAG00000003671
N
0.746
A7MB26_BOVIN
Bos taurus
ENSBTAG00000017164
N
0.746
LARP4B
Macropus eugenii
ENSMEUG00000013114
N
0.746
ENSCPOG00000020519
Cavia porcellus
ENSCPOG00000020519
N
0.746
LARP4
Callithrix jacchus
ENSCJAG00000021131
N
0.729
LARP4
Canis familiaris
ENSCAFG00000008174
N
0.729
LARP4
Tarsius syrichta
ENSTSYG00000004342
N
0.729
LARP4
Tursiops truncatus
ENSTTRG00000003764
N
0.729
Ame_R010643
Ailuropoda melanoleuca
Ame_R010643
N
0.729
AAI24888
Xenopus laevis
AAI24888
N
0.729
LARP4
Sorex araneus
ENSSARG00000012469
N
0.729
LARP4
Gorilla gorilla
ENSGGOG00000015230
N
0.729
LARP4
Ornithorhynchus anatinus
ENSOANG00000004373
N
0.729
Larp4
Mus musculus
ENSMUSG00000023025
N
0.729
LARP4
Loxodonta africana
ENSLAFG00000005160
N
0.729
LOC693337
Macaca mulatta
ENSMMUG00000008172
N
0.729
ENSPPYG00000004512
Pongo pygmaeus
ENSPPYG00000004512
N
0.729
LARP4
Homo sapiens
ENSG00000161813
N
0.729
LARP4
Equus caballus
ENSECAG00000012479
N
0.729
LARP4
Pteropus vampyrus
ENSPVAG00000016840
N
0.729
XR_019868.1
Pan troglodytes
ENSPTRG00000004935
N
0.729
LARP4
Tupaia belangeri
ENSTBEG00000005167
N
0.729
LOC683071
Rattus norvegicus
ENSRNOG00000042017
N
0.712
LARP4
Dasypus novemcinctus
ENSDNOG00000018540
N
0.712
LARP4
Monodelphis domestica
ENSMODG00000004844
N
0.712
LARP4
Anolis carolinensis
ENSACAG00000017133
N
0.712
LARP4
Ochotona princeps
ENSOPRG00000004592
N
0.712
LARP4
Taeniopygia guttata
ENSTGUG00000003479
N
0.712
ENSOCUG00000026872
Oryctolagus cuniculus
ENSOCUG00000026872
N
0.712
AAI30197
Xenopus laevis
AAI30197
N
0.712
ENSOCUG00000021417
Oryctolagus cuniculus
ENSOCUG00000021417
N
0.712