CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP4B
(
Gasterosteus aculeatus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSGACG00000017535
T22758_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000023169
La
189
246
LKKTLEFCLSRENLASDMYLISQMDSDQYVPIVTVANLDHVKKLSTDVELIVDILRSL
Links
Other
La
family RBPs
Other
Gasterosteus aculeatus
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP4B
Oryzias latipes
ENSORLG00000006080
N
0.966
LARP4B
Tetraodon nigroviridis
ENSTNIG00000004571
N
0.948
LARP4B
Tetraodon nigroviridis
ENSTNIG00000007991
N
0.948
LARP4B
Tarsius syrichta
ENSTSYG00000002568
N
0.914
larp4b
Xenopus tropicalis
ENSXETG00000016882
N
0.914
ENSTGUG00000013982
Taeniopygia guttata
ENSTGUG00000013982
N
0.914
LARP5
Gallus gallus
ENSGALG00000006672
N
0.914
Ame_R012731
Ailuropoda melanoleuca
Ame_R012731
N
0.914
LARP4B
Echinops telfairi
ENSETEG00000011249
N
0.914
LARP4B
Homo sapiens
ENSG00000107929
N
0.914
LARP4B
Dasypus novemcinctus
ENSDNOG00000002462
N
0.914
LARP4B
Canis familiaris
ENSCAFG00000005546
N
0.914
LARP4B
Anolis carolinensis
ENSACAG00000002858
N
0.914
Larp5
Rattus norvegicus
ENSRNOG00000015888
N
0.914
LARP5
Taeniopygia guttata
ENSTGUG00000000811
N
0.914
LARP4B
Meleagris gallopavo
ENSMGAG00000005472
N
0.914
Larp4b
Mus musculus
ENSMUSG00000033499
N
0.914
LARP4B
Macaca mulatta
ENSMMUG00000005279
N
0.914
ENSPPYG00000002035
Pongo pygmaeus
ENSPPYG00000002035
N
0.914
LARP4B
Ochotona princeps
ENSOPRG00000003300
N
0.914
LARP4B
Loxodonta africana
ENSLAFG00000015334
N
0.914
LARP4B
Pan troglodytes
ENSPTRG00000002235
N
0.914
LARP4B
Ornithorhynchus anatinus
ENSOANG00000006100
N
0.898
LARP4B
Oryctolagus cuniculus
ENSOCUG00000004950
N
0.898
LARP4B
Gorilla gorilla
ENSGGOG00000003572
N
0.898
LARP4B
Myotis lucifugus
ENSMLUG00000005880
N
0.897
LOC100057616
Equus caballus
ENSECAG00000024040
N
0.897
LARP4B
Bos taurus
ENSBTAG00000013899
N
0.897
LARP4B
Erinaceus europaeus
ENSEEUG00000008391
N
0.897
LARP4B
Monodelphis domestica
ENSMODG00000005957
N
0.897
LARP4B
Sorex araneus
ENSSARG00000001243
N
0.897
LARP4B
Spermophilus tridecemlineatus
ENSSTOG00000000587
N
0.897
LARP4B
Tursiops truncatus
ENSTTRG00000011151
N
0.897
LARP4B
Sus scrofa
ENSSSCG00000011162
N
0.897
LARP4B
Cavia porcellus
ENSCPOG00000009375
N
0.881
LARP4B
Choloepus hoffmanni
ENSCHOG00000007831
N
0.879
LARP4B
Vicugna pacos
ENSVPAG00000000128
N
0.828
LARP4B
Danio rerio
ENSDARG00000062146
N
0.828
LARP4B
Pteropus vampyrus
ENSPVAG00000009784
N
0.810
LARP4B
Felis catus
ENSFCAG00000000721
N
0.724