fgenesh2_pg.scaffold_154000069 (Branchiostoma floridae)
La

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF05383 (La) IPR006630 fgenesh2_pg.scaffold_154000069 T23059_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_154000069 La 165 222

Links

Other La family RBPs
Other Branchiostoma floridae RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm25495 Apis mellifera amel4_ncbi_hmm25495 N 0.776
DGIL_AUG5s5549g4t1 Acyrtosiphon pisum DGIL_AUG5s5549g4t1 N 0.759
GK17513 Drosophila willistoni FBgn0219512 N 0.759
AGAP006460 Anopheles gambiae AGAP006460 N 0.759
nasonia_NCBI_hmm376894 Nasonia vitripennis nasonia_NCBI_hmm376894 N 0.759
e_gw1.29.70.1 Daphnia pulex e_gw1.29.70.1 N 0.759
PHUM582400 Pediculus humanus PHUM582400 N 0.759
GF10124 Drosophila ananassae FBgn0087165 N 0.724
GG15116 Drosophila erecta FBgn0107369 N 0.724
CG11505 Drosophila melanogaster FBgn0035424 N 0.724
GE21342 Drosophila yakuba FBgn0238604 N 0.724
GM14551 Drosophila sechellia FBgn0169472 N 0.724
XP_798222.2 Strongylocentrotus purpuratus XP_798222.2 N 0.724
AAEL010841 Aedes aegypti AAEL010841 N 0.724
XP_001184765.1 Strongylocentrotus purpuratus XP_001184765.1 N 0.724
GJ15458 Drosophila virilis FBgn0202651 N 0.707
LARP4 Danio rerio ENSDARG00000074979 N 0.707
XP_001178699.1 Strongylocentrotus purpuratus XP_001178699.1 N 0.707
XP_001200300.1 Strongylocentrotus purpuratus XP_001200300.1 N 0.707
fgeneshTA2_pg.C_scaffold_3000241 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_3000241 N 0.707
GA11040-RA Drosophila pseudoobscura FBgn0071096 N 0.707
GI12555 Drosophila mojavensis FBgn0135312 N 0.707