CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
LARP7
(
Takifugu rubripes
)
La,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
PF00076 (RRM_1)
IPR006630
IPR000504
ENSTRUG00000004996
T23444_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000011960
La
34
93
VKKQVEFWFGDVNLHKDRFLRKVMEESEDGYVDLSLLTSFNRMKKLTTDTKLVARALKNS
ENSTRUP00000011960
RRM
123
186
VYVELLPKDVTHGWIERVFAKCGTVVYVSVPRYKSSGDPKGFAFVEFEKEEEARQAIEVLNNPP
Links
Other
La,RRM
family RBPs
Other
Takifugu rubripes
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP7
Oryzias latipes
ENSORLG00000004978
N
0.798
LARP7
Gasterosteus aculeatus
ENSGACG00000019618
N
0.792
Q5ZIT4_CHICK
Gallus gallus
ENSGALG00000012048
N
0.774
LARP7
Oryctolagus cuniculus
ENSOCUG00000007073
N
0.766
Q0P5K0_BOVIN
Bos taurus
ENSBTAG00000009632
N
0.758
LARP7
Vicugna pacos
ENSVPAG00000010502
N
0.758
LARP7
Sus scrofa
ENSSSCG00000009119
N
0.758
LARP7
Tarsius syrichta
ENSTSYG00000006769
N
0.758
LARP7
Anolis carolinensis
ENSACAG00000010662
N
0.758
LARP7
Equus caballus
ENSECAG00000000834
N
0.758
ENSDORG00000008896
Dipodomys ordii
ENSDORG00000008896
N
0.758
LARP7
Erinaceus europaeus
ENSEEUG00000012824
N
0.758
LARP7
Callithrix jacchus
ENSCJAG00000003711
N
0.750
LARP7
Pan troglodytes
ENSPTRG00000016380
N
0.750
LARP7
Homo sapiens
ENSG00000174720
N
0.750
ENSGGOG00000023567
Gorilla gorilla
ENSGGOG00000023567
N
0.750
LARP7
Tupaia belangeri
ENSTBEG00000009188
N
0.750
LARP7
Pteropus vampyrus
ENSPVAG00000000282
N
0.750
LARP7
Otolemur garnettii
ENSOGAG00000001643
N
0.742
LARP7
Dasypus novemcinctus
ENSDNOG00000013761
N
0.734
LARP7
Ornithorhynchus anatinus
ENSOANG00000009298
N
0.714