LOC_Os09g32210 (Oryza sativa)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 LOC_Os09g32210 T24395_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os09g32210.1 PUF 651 685
LOC_Os09g32210.1 PUF 687 721
LOC_Os09g32210.1 PUF 723 754
LOC_Os09g32210.1 PUF 759 793
LOC_Os09g32210.1 PUF 799 824
LOC_Os09g32210.1 PUF 832 866
LOC_Os09g32210.1 PUF 868 902
LOC_Os09g32210.1 PUF 910 944

Links

Other PUF family RBPs
Other Oryza sativa RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sb07g026995 Sorghum bicolor Sb07g026995 N 0.746
GRMZM2G035118 Zea mays GRMZM2G035118 N 0.739
BGIOSIBCE028530 Oryza indica BGIOSIBCE028530 N 0.736
LOC_Os08g40830 Oryza sativa LOC_Os08g40830 N 0.736
GRMZM2G449123 Zea mays GRMZM2G449123 N 0.731
BRADI3G40520 Brachypodium distachyon BRADI3G40520 N 0.714