GRMZM2G035118 (Zea mays)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 GRMZM2G035118 T24941_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G035118_P01 PUF 657 691
GRMZM2G035118_P01 PUF 693 727
GRMZM2G035118_P01 PUF 729 763
GRMZM2G035118_P01 PUF 765 798
GRMZM2G035118_P01 PUF 801 835
GRMZM2G035118_P01 PUF 838 873
GRMZM2G035118_P01 PUF 874 908
GRMZM2G035118_P01 PUF 916 950
GRMZM2G035118_P02 PUF 220 253
GRMZM2G035118_P02 PUF 256 290
GRMZM2G035118_P02 PUF 293 328
GRMZM2G035118_P02 PUF 329 363
GRMZM2G035118_P02 PUF 371 405

Links

Other PUF family RBPs
Other Zea mays RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sb07g026995 Sorghum bicolor Sb07g026995 N 0.957
LOC_Os08g40830 Oryza sativa LOC_Os08g40830 N 0.932
BGIOSIBCE028530 Oryza indica BGIOSIBCE028530 N 0.932
GRMZM2G449123 Zea mays GRMZM2G449123 N 0.921
BRADI3G40520 Brachypodium distachyon BRADI3G40520 N 0.896
GSVIVG00029553001 Vitis vinifera GSVIVG00029553001 N 0.777
Cucsa.149730 Cucumis sativus Cucsa.149730 N 0.765
MDP0000277305 Malus x domestica MDP0000277305 N 0.765
B9HK27_POPTR Populus trichocarpa POPTR_0008s00490 N 0.758
GSVIVG00031557001 Vitis vinifera GSVIVG00031557001 N 0.756
MDP0000265231 Malus x domestica MDP0000265231 N 0.753
PK12245.1 Cannabis sativa PK12245.1 N 0.753
30169.m006300 Ricinus communis 30169.m006300 N 0.751
ppa000898m Prunus persica ppa000898m N 0.749
ppa016404m Prunus persica ppa016404m N 0.748
cassava9350.m1 Manihot esculenta cassava9350.m1 N 0.744
MDP0000313902 Malus x domestica MDP0000313902 N 0.740
LOC_Os09g32210 Oryza sativa LOC_Os09g32210 N 0.739
cassava43126.valid.m1 Manihot esculenta cassava43126.valid.m1 N 0.731
Glyma09g06460.1 Glycine max Glyma09g06460.1 N 0.728
Glyma15g17680.1 Glycine max Glyma15g17680.1 N 0.728
mgf006786m Mimulus guttatus mgf006786m N 0.727
BRADI4G34110 Brachypodium distachyon BRADI4G34110 N 0.726
POPTR_0022s00840 Populus trichocarpa POPTR_0022s00840 N 0.721
gw1.2.45.1 Selaginella moellendorfii gw1.2.45.1 N 0.713
e_gw1.96.1.1 Physcomitrella patens e_gw1.96.1.1 N 0.713
mgf002285m Mimulus guttatus mgf002285m N 0.710
Glyma13g00670.1 Glycine max Glyma13g00670.1 N 0.709
Medtr2g041730 Medicago truncatula Medtr2g041730 N 0.707
estExt_Genewise1.C_350182 Physcomitrella patens estExt_Genewise1.C_350182 N 0.702