GRMZM2G449123 (Zea mays)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 GRMZM2G449123 T24952_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G449123_P01 PUF 714 748
GRMZM2G449123_P01 PUF 750 781
GRMZM2G449123_P02 PUF 707 741
GRMZM2G449123_P02 PUF 743 777
GRMZM2G449123_P02 PUF 779 799
GRMZM2G449123_P03 PUF 714 748
GRMZM2G449123_P03 PUF 750 781
GRMZM2G449123_P04 PUF 714 748
GRMZM2G449123_P04 PUF 750 781
GRMZM2G449123_P05 PUF 714 748
GRMZM2G449123_P05 PUF 750 781
GRMZM2G449123_P05 PUF 788 818
GRMZM2G449123_P06 PUF 707 741
GRMZM2G449123_P06 PUF 743 777
GRMZM2G449123_P06 PUF 779 799
GRMZM2G449123_P07 PUF 707 741
GRMZM2G449123_P07 PUF 743 777
GRMZM2G449123_P07 PUF 779 799
GRMZM2G449123_P08 PUF 707 741
GRMZM2G449123_P08 PUF 743 777
GRMZM2G449123_P08 PUF 779 799
GRMZM2G449123_P09 PUF 714 748
GRMZM2G449123_P09 PUF 750 784
GRMZM2G449123_P09 PUF 786 820
GRMZM2G449123_P09 PUF 822 855
GRMZM2G449123_P09 PUF 858 892
GRMZM2G449123_P09 PUF 896 929
GRMZM2G449123_P09 PUF 931 965
GRMZM2G449123_P09 PUF 973 1007
GRMZM2G449123_P10 PUF 707 741
GRMZM2G449123_P10 PUF 743 777
GRMZM2G449123_P10 PUF 779 813
GRMZM2G449123_P10 PUF 815 848
GRMZM2G449123_P10 PUF 851 885
GRMZM2G449123_P10 PUF 889 922
GRMZM2G449123_P10 PUF 924 958
GRMZM2G449123_P10 PUF 966 1000
GRMZM2G449123_P11 PUF 12 45
GRMZM2G449123_P11 PUF 48 82
GRMZM2G449123_P11 PUF 86 119
GRMZM2G449123_P11 PUF 121 155
GRMZM2G449123_P11 PUF 163 197
GRMZM2G449123_P12 PUF 12 45
GRMZM2G449123_P12 PUF 48 82
GRMZM2G449123_P12 PUF 86 119
GRMZM2G449123_P12 PUF 121 155
GRMZM2G449123_P12 PUF 170 200
GRMZM2G449123_P13 PUF 12 45
GRMZM2G449123_P13 PUF 48 82
GRMZM2G449123_P13 PUF 86 119
GRMZM2G449123_P13 PUF 121 155
GRMZM2G449123_P13 PUF 163 197

Links

Other PUF family RBPs
Other Zea mays RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sb07g026995 Sorghum bicolor Sb07g026995 N 0.932
GRMZM2G035118 Zea mays GRMZM2G035118 N 0.921
LOC_Os08g40830 Oryza sativa LOC_Os08g40830 N 0.904
BGIOSIBCE028530 Oryza indica BGIOSIBCE028530 N 0.904
BRADI3G40520 Brachypodium distachyon BRADI3G40520 N 0.868
Cucsa.149730 Cucumis sativus Cucsa.149730 N 0.761
LjSGA_088847.1 Lotus japonicus LjSGA_088847.1 N 0.758
GSVIVG00029553001 Vitis vinifera GSVIVG00029553001 N 0.758
MDP0000277305 Malus x domestica MDP0000277305 N 0.757
B9HK27_POPTR Populus trichocarpa POPTR_0008s00490 N 0.750
ppa016404m Prunus persica ppa016404m N 0.744
MDP0000313902 Malus x domestica MDP0000313902 N 0.736
30169.m006300 Ricinus communis 30169.m006300 N 0.736
ppa000898m Prunus persica ppa000898m N 0.734
PK12245.1 Cannabis sativa PK12245.1 N 0.734
MDP0000265231 Malus x domestica MDP0000265231 N 0.734
cassava9350.m1 Manihot esculenta cassava9350.m1 N 0.732
LOC_Os09g32210 Oryza sativa LOC_Os09g32210 N 0.731
GSVIVG00031557001 Vitis vinifera GSVIVG00031557001 N 0.727
BRADI4G34110 Brachypodium distachyon BRADI4G34110 N 0.714
Glyma09g06460.1 Glycine max Glyma09g06460.1 N 0.713
cassava43126.valid.m1 Manihot esculenta cassava43126.valid.m1 N 0.713
mgf006786m Mimulus guttatus mgf006786m N 0.712
gw1.2.45.1 Selaginella moellendorfii gw1.2.45.1 N 0.708
mgf002285m Mimulus guttatus mgf002285m N 0.706
Glyma15g17680.1 Glycine max Glyma15g17680.1 N 0.706
POPTR_0022s00840 Populus trichocarpa POPTR_0022s00840 N 0.706
e_gw1.96.1.1 Physcomitrella patens e_gw1.96.1.1 N 0.705
cassava19437.valid.m1 Manihot esculenta cassava19437.valid.m1 N 0.705