CC1G_13963 (Coprinopsis cinerea)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		CC1G_13963 T25298_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CC1G_13963T0 RRM 467 525
CC1G_13963T0 RRM 590 653
CC1G_13963T0 PUF 822 856
CC1G_13963T0 PUF 866 892
CC1G_13963T0 PUF 896 928
CC1G_13963T0 PUF 930 965
CC1G_13963T0 PUF 968 1002

Links

Other PUF,RRM family RBPs
Other Coprinopsis cinerea RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gwh1.2.40.1 Laccaria bicolor gwh1.2.40.1 N 0.925
estExt_Genewise1Plus.C_11031 Pleurotus ostreatus estExt_Genewise1Plus.C_11031 N 0.901
EuGene2000855 Heterobasidion annosum EuGene2000855 N 0.898
estExt_fgenesh2_pg.C_20480 Agaricus bisporus estExt_fgenesh2_pg.C_20480 N 0.895
estExt_Genewise1Plus.C_21122 Schizophyllum commune estExt_Genewise1Plus.C_21122 N 0.888
estExt_fgenesh2_pg.C_200047 Serpula lacrymans estExt_fgenesh2_pg.C_200047 N 0.886
estExt_Genewise1.C_220013 Postia placenta estExt_Genewise1.C_220013 N 0.836