gwh1.2.40.1 (Laccaria bicolor)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		gwh1.2.40.1 T25372_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gwh1.2.40.1 RRM 394 452
gwh1.2.40.1 RRM 519 582
gwh1.2.40.1 PUF 760 794
gwh1.2.40.1 PUF 800 830
gwh1.2.40.1 PUF 834 866
gwh1.2.40.1 PUF 868 903
gwh1.2.40.1 PUF 907 940

Links

Other PUF,RRM family RBPs
Other Laccaria bicolor RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pg.C_200047 Serpula lacrymans estExt_fgenesh2_pg.C_200047 N 0.936
estExt_Genewise1Plus.C_11031 Pleurotus ostreatus estExt_Genewise1Plus.C_11031 N 0.932
CC1G_13963 Coprinopsis cinerea CC1G_13963 N 0.925
estExt_fgenesh2_pg.C_20480 Agaricus bisporus estExt_fgenesh2_pg.C_20480 N 0.916
EuGene2000855 Heterobasidion annosum EuGene2000855 N 0.895
estExt_Genewise1Plus.C_21122 Schizophyllum commune estExt_Genewise1Plus.C_21122 N 0.875
estExt_Genewise1.C_220013 Postia placenta estExt_Genewise1.C_220013 N 0.859