CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AO090206000081
(
Aspergillus oryzae
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
CADAORAG00012242
T26235_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAORAP00011997
RanBP ZF
99
115
NATWICPICTFSNPIPS
CADAORAP00011997
RanBP ZF
176
198
SCPRCTFVNHPSLHECEICGASL
Links
Other
RanBP ZF
family RBPs
Other
Aspergillus oryzae
RBPs
16 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AFLA_114740
Aspergillus flavus
CADAFLAG00013392
N
1.000
fgenesh1_pm.00795_#_61
Aspergillus carbonarius
fgenesh1_pm.00795_#_61
N
0.854
ATEG_02228
Aspergillus terreus
CADATEAG00000017
N
0.854
Pc13g06240
Penicillium chrysogenum
Pc13g06240
N
0.833
An14g00750
Aspergillus niger
CADANGAG00011011
N
0.829
ACLA_054290
Aspergillus clavatus
CADACLAG00005245
N
0.829
PMAA_085380
Penicillium marneffei
PMAA_085380
N
0.829
UREG_02651
Uncinocarpus reesii
UREG_02651
N
0.780
HCAG_08016
Histoplasma capsulatum
HCAG_08016
N
0.767
AB01983.1
Alternaria brassicicola
AB01983.1
N
0.756
estExt_fgenesh1_pg.C_chr_40551
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_40551
N
0.744
MCYG_02556
Microsporum canis
MCYG_02556
N
0.738
CPSG_05597
Coccidioides posadasii
CPSG_05597
N
0.738
estExt_Genewise1.C_30334
Cochliobolus heterostrophus C5
estExt_Genewise1.C_30334
N
0.732
BDBG_07164
Blastomyces dermatitidis
BDBG_07164
N
0.721
CIMG_08661
Coccidioides immitis
CIMG_08661
N
0.721