PK08935.1 (Cannabis sativa)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 PK08935.1 T26128_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK08935.1 RanBP ZF 292 321
PK08935.1 RanBP ZF 325 354

Links

Other RanBP ZF family RBPs
Other Cannabis sativa RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava12379.valid.m1 Manihot esculenta cassava12379.valid.m1 N 0.900
ppa001151m Prunus persica ppa001151m N 0.900
29818.m000389 Ricinus communis 29818.m000389 N 0.900
GSVIVG00029939001 Vitis vinifera GSVIVG00029939001 N 0.883
MDP0000224484 Malus x domestica MDP0000224484 N 0.883
Medtr7g103850 Medicago truncatula Medtr7g103850 N 0.867
LjT26C04.50.nd Lotus japonicus LjT26C04.50.nd N 0.850
Glyma19g29710.1 Glycine max Glyma19g29710.1 N 0.836
Cucsa.337020 Cucumis sativus Cucsa.337020 N 0.836
BRADI2G53210 Brachypodium distachyon BRADI2G53210 N 0.833
Glyma03g00950.1 Glycine max Glyma03g00950.1 N 0.803
LOC_Os01g59980 Oryza sativa LOC_Os01g59980 N 0.783
SB03G037900 Sorghum bicolor Sb03g037900 N 0.783
GRMZM2G312244 Zea mays GRMZM2G312244 N 0.783
GRMZM2G069106 Zea mays GRMZM2G069106 N 0.783
VAR3 Arabidopsis thaliana AT5G17790-TAIR-G N 0.770
XM_002873808.1 Arabidopsis lyrata Al_scaffold_0006_1692 N 0.754