BRADI1G51070 (Brachypodium distachyon)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 BRADI1G51070 T26214_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G51070.1 RanBP ZF 6 35
BRADI1G51070.1 RanBP ZF 54 78
BRADI1G51070.1 RanBP ZF 103 134

Links

Other RanBP ZF family RBPs
Other Brachypodium distachyon RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os06g04920 Oryza sativa LOC_Os06g04920 N 0.898
GRMZM2G404897 Zea mays GRMZM2G404897 N 0.874
SB10G002790 Sorghum bicolor Sb10g002790 N 0.862
LOC_Os02g10920 Oryza sativa LOC_Os02g10920 N 0.733
29841.m002811 Ricinus communis 29841.m002811 N 0.733
A9P992_POPTR Populus trichocarpa POPTR_0006s26750 N 0.731
B9IKV1_POPTR Populus trichocarpa POPTR_0018s01490 N 0.731
cassava8165.valid.m1 Manihot esculenta cassava8165.valid.m1 N 0.723
cassava25022.valid.m1 Manihot esculenta cassava25022.valid.m1 N 0.722
cassava25023.valid.m1 Manihot esculenta cassava25023.valid.m1 N 0.722
GRMZM2G116079 Zea mays GRMZM2G116079 N 0.714
Sb04g007110 Sorghum bicolor Sb04g007110 N 0.714
29848.m004659 Ricinus communis 29848.m004659 N 0.713
XM_002882911.1 Arabidopsis lyrata fgenesh2_kg.3__1723__AT3G15680.1 N 0.710
A9PB85_POPTR Populus trichocarpa POPTR_0001s17280 N 0.707
BRADI3G07610 Brachypodium distachyon BRADI3G07610 N 0.703
cassava36675.valid.m1 Manihot esculenta cassava36675.valid.m1 N 0.700