CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGG_12101
(
Magnaporthe oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGG_12101
T29789_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_12101T0
RRM
177
245
VFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESVAAALQLTGQKLLGIPV
MGG_12101T0
RRM
275
327
LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDATQAP
MGG_12101T0
RRM
471
520
RXEEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRYFGGQQCT
Links
Other
RRM
family RBPs
Other
Magnaporthe oryzae
RBPs
42 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CHGG_08209
Chaetomium globosum
CHGG_08209
N
0.811
estExt_Genewise1Plus.C_100357
Neurospora tetrasperma
estExt_Genewise1Plus.C_100357
N
0.801
estExt_Genewise1Plus.C_160212
Neurospora discreta
estExt_Genewise1Plus.C_160212
N
0.801
Pa_6_4410
Podospora anserina
Pa_6_4410
N
0.801
Pad-1
Neurospora crassa
NCU03491
N
0.801
estExt_fgenesh1_pg.C_70696
Myceliophthora thermophila
estExt_fgenesh1_pg.C_70696
N
0.796
estExt_fgenesh2_pm.C_60094
Thielavia terrestris
estExt_fgenesh2_pm.C_60094
N
0.796
ACLA_019550
Aspergillus clavatus
CADACLAG00002508
N
0.760
e_gw1.00042.124.1
Aspergillus carbonarius
e_gw1.00042.124.1
N
0.755
estExt_fgenesh5_pg.C_10453
Trichoderma reesei
estExt_fgenesh5_pg.C_10453
N
0.755
ATEG_05213
Aspergillus terreus
CADATEAG00005232
N
0.755
AO090005001118
Aspergillus oryzae
CADAORAG00003032
N
0.755
AFLA_083600
Aspergillus flavus
CADAFLAG00001140
N
0.755
FOXG_07909
Fusarium oxysporum
FOXG_07909
N
0.755
FVEG_04832
Fusarium verticillioides
FVEG_04832
N
0.755
SS1G_00444
Sclerotinia sclerotiorum
SS1G_00444
N
0.750
estExt_Genewise1Plus.C_sca_3_chr4_2_00461
Nectria haematococca
estExt_Genewise1Plus.C_sca_3_chr4_2_00461
N
0.750
PMAA_065980
Penicillium marneffei
PMAA_065980
N
0.750
BC1G_00662
Botrytis cinerea
BC1G_00662
N
0.750
CPSG_04315
Coccidioides posadasii
CPSG_04315
N
0.750
UREG_02855
Uncinocarpus reesii
UREG_02855
N
0.750
CIMG_03100
Coccidioides immitis
CIMG_03100
N
0.750
FGSG_05165
Fusarium graminearum
FGSG_05165
N
0.750
estExt_Genewise1Plus.C_20716
Trichoderma virens
estExt_Genewise1Plus.C_20716
N
0.750
NFIA_009510
Neosartorya fischeri
CADNFIAG00001864
N
0.750
AFUA_1G15810
Aspergillus fumigatus
CADAFUAG00006904
N
0.750
An01g14180
Aspergillus niger
CADANGAG00001415
N
0.750
ANIA_00917
Aspergillus nidulans
CADANIAG00001739
N
0.745
e_gw1.12.188.1
Trichoderma atroviride
e_gw1.12.188.1
N
0.745
PABG_06048
Paracoccidioides brasiliensis
PABG_06048
N
0.735
VDAG_07019
Verticillium dahliae
VDAG_07019
N
0.735
TEQG_08002
Trichophyton equinum
TEQG_08002
N
0.735
TRV_02070
Trichophyton verrucosum
TRV_02070
N
0.735
MGYG_07158
Microsporum gypseum
MGYG_07158
N
0.735
TERG_08096
Trichophyton rubrum
TERG_08096
N
0.735
TESG_03203
Trichophyton tonsurans
TESG_03203
N
0.735
MCYG_00053
Microsporum canis
MCYG_00053
N
0.735
ARB_02131
Arthroderma benhamiae
ARB_02131
N
0.735
HCAG_02257
Histoplasma capsulatum
HCAG_02257
N
0.730
BDBG_07521
Blastomyces dermatitidis
BDBG_07521
N
0.730
GLRG_08678
Colletotrichum graminicola
GLRG_08678
N
0.719
Pc16g14480
Penicillium chrysogenum
Pc16g14480
N
0.709