CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_08958
(
Microsporum gypseum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGYG_08958
T29857_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_08958T0
RRM
50
110
SSVAEKRSREYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDGKIV
MGYG_08958T0
RRM
148
210
IFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEI
Links
Other
RRM
family RBPs
Other
Microsporum gypseum
RBPs
29 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_05069
Arthroderma benhamiae
ARB_05069
N
0.864
TERG_03265
Trichophyton rubrum
TERG_03265
N
0.864
MCYG_04652
Microsporum canis
MCYG_04652
N
0.864
TEQG_02438
Trichophyton equinum
TEQG_02438
N
0.864
TRV_06675
Trichophyton verrucosum
TRV_06675
N
0.840
PMAA_028640
Penicillium marneffei
PMAA_028640
N
0.799
HCAG_03640
Histoplasma capsulatum
HCAG_03640
N
0.783
BDBG_05401
Blastomyces dermatitidis
BDBG_05401
N
0.775
AFUA_2G06090
Aspergillus fumigatus
CADAFUAG00003703
N
0.773
ACLA_068230
Aspergillus clavatus
CADACLAG00007015
N
0.773
ANIA_10941
Aspergillus nidulans
CADANIAG00000536
N
0.768
NFIA_082870
Neosartorya fischeri
CADNFIAG00006872
N
0.765
AFLA_130230
Aspergillus flavus
CADAFLAG00010081
N
0.761
AO090001000725
Aspergillus oryzae
CADAORAG00000662
N
0.761
TESG_02793
Trichophyton tonsurans
TESG_02793
N
0.756
CPSG_02224
Coccidioides posadasii
CPSG_02224
N
0.754
CIMG_00990
Coccidioides immitis
CIMG_00990
N
0.754
ATEG_06805
Aspergillus terreus
CADATEAG00006229
N
0.754
UREG_00938
Uncinocarpus reesii
UREG_00938
N
0.754
Pc22g08010
Penicillium chrysogenum
Pc22g08010
N
0.739
An02g14690
Aspergillus niger
CADANGAG00002994
N
0.732
fgenesh1_pg.00082_#_116
Aspergillus carbonarius
fgenesh1_pg.00082_#_116
N
0.730
SS1G_05220
Sclerotinia sclerotiorum
SS1G_05220
N
0.725
EAT82933.2
Phaeosphaeria nodorum
EAT82933.2
N
0.714
MGG_06881
Magnaporthe oryzae
MGG_06881
N
0.710
BC1G_12993
Botrytis cinerea
BC1G_12993
N
0.710
NCU12158
Neurospora crassa
NCU12158
N
0.703
estExt_fgenesh1_pg.C_10265
Neurospora tetrasperma
estExt_fgenesh1_pg.C_10265
N
0.703
estExt_fgenesh3_pm.C_10926
Neurospora discreta
estExt_fgenesh3_pm.C_10926
N
0.703