CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MGG_06881
(
Magnaporthe oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGG_06881
T29769_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_06881T0
RRM
185
253
MFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIID
MGG_06881T0
RRM
269
337
IFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLARDLEIHGKLIE
Links
Other
RRM
family RBPs
Other
Magnaporthe oryzae
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_Genewise1Plus.C_70091
Cryphonectria parasitica
estExt_Genewise1Plus.C_70091
N
0.928
gw1.3.2310.1
Myceliophthora thermophila
gw1.3.2310.1
N
0.928
estExt_Genewise1.C_23240
Thielavia terrestris
estExt_Genewise1.C_23240
N
0.928
NCU12158
Neurospora crassa
NCU12158
N
0.920
CHGG_07099
Chaetomium globosum
CHGG_07099
N
0.920
estExt_fgenesh3_pm.C_10926
Neurospora discreta
estExt_fgenesh3_pm.C_10926
N
0.920
estExt_fgenesh1_pg.C_10265
Neurospora tetrasperma
estExt_fgenesh1_pg.C_10265
N
0.920
GLRG_03331
Colletotrichum graminicola
GLRG_03331
N
0.913
Pa_2_12560
Podospora anserina
Pa_2_12560
N
0.913
VDBG_00519
Verticillium albo atrum
VDBG_00519
N
0.906
FOXG_05191
Fusarium oxysporum
FOXG_05191
N
0.891
FVEG_02942
Fusarium verticillioides
FVEG_02942
N
0.891
estExt_GeneWisePlus.C_210250
Trichoderma reesei
estExt_GeneWisePlus.C_210250
N
0.884
FGSG_13728
Fusarium graminearum
FGSG_13728
N
0.884
e_gw1.5.1166.1
Nectria haematococca
e_gw1.5.1166.1
N
0.884
estExt_fgenesh1_pg.C_40107
Trichoderma atroviride
estExt_fgenesh1_pg.C_40107
N
0.877
estExt_Genewise1Plus.C_230018
Trichoderma virens
estExt_Genewise1Plus.C_230018
N
0.870
UREG_00938
Uncinocarpus reesii
UREG_00938
N
0.855
CPSG_02224
Coccidioides posadasii
CPSG_02224
N
0.855
CIMG_00990
Coccidioides immitis
CIMG_00990
N
0.855
BDBG_05401
Blastomyces dermatitidis
BDBG_05401
N
0.855
Pc22g08010
Penicillium chrysogenum
Pc22g08010
N
0.848
ANIA_10941
Aspergillus nidulans
CADANIAG00000536
N
0.848
HCAG_03640
Histoplasma capsulatum
HCAG_03640
N
0.848
ATEG_06805
Aspergillus terreus
CADATEAG00006229
N
0.848
AFLA_130230
Aspergillus flavus
CADAFLAG00010081
N
0.848
AO090001000725
Aspergillus oryzae
CADAORAG00000662
N
0.848
BC1G_12993
Botrytis cinerea
BC1G_12993
N
0.841
PMAA_028640
Penicillium marneffei
PMAA_028640
N
0.833
An02g14690
Aspergillus niger
CADANGAG00002994
N
0.833
SS1G_05220
Sclerotinia sclerotiorum
SS1G_05220
N
0.826
fgenesh1_pg.00082_#_116
Aspergillus carbonarius
fgenesh1_pg.00082_#_116
N
0.826
TERG_03265
Trichophyton rubrum
TERG_03265
N
0.819
ARB_05069
Arthroderma benhamiae
ARB_05069
N
0.819
AFUA_2G06090
Aspergillus fumigatus
CADAFUAG00003703
N
0.819
MCYG_04652
Microsporum canis
MCYG_04652
N
0.819
NFIA_082870
Neosartorya fischeri
CADNFIAG00006872
N
0.812
ACLA_068230
Aspergillus clavatus
CADACLAG00007015
N
0.812
GSTUMT00005496001
Tuber melanosporum
GSTUMT00005496001
N
0.806
TEQG_02438
Trichophyton equinum
TEQG_02438
N
0.804
estExt_Genewise1Plus.C_240153
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_240153
N
0.797
AB01113.1
Alternaria brassicicola
AB01113.1
N
0.797
TRV_06675
Trichophyton verrucosum
TRV_06675
N
0.783
SJAG_03853
Schizosaccharomyces japonicus
SJAG_03853
N
0.770
SPOG_01457
Schizosaccharomyces cryophilus
SPOG_01457
N
0.763
SOCG_02545
Schizosaccharomyces octosporus
SOCG_02545
N
0.755
gw1.6.1353.1
Mycosphaerella graminicola
gw1.6.1353.1
N
0.748
SPBC660.15
Schizosaccharomyces pombe
SPBC660.15
N
0.748
estExt_Genewise1Plus.C_500038
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_500038
N
0.743
MGYG_08958
Microsporum gypseum
MGYG_08958
N
0.710
EAT82933.2
Phaeosphaeria nodorum
EAT82933.2
N
0.710
TESG_02793
Trichophyton tonsurans
TESG_02793
N
0.703