CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_02793
(
Trichophyton tonsurans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TESG_02793
T31157_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_02793T0
RRM
1
56
MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTLYKI
TESG_02793T0
RRM
73
135
IFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEI
Links
Other
RRM
family RBPs
Other
Trichophyton tonsurans
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TRV_06675
Trichophyton verrucosum
TRV_06675
N
0.906
ARB_05069
Arthroderma benhamiae
ARB_05069
N
0.871
MCYG_04652
Microsporum canis
MCYG_04652
N
0.871
TEQG_02438
Trichophyton equinum
TEQG_02438
N
0.871
TERG_03265
Trichophyton rubrum
TERG_03265
N
0.871
PMAA_028640
Penicillium marneffei
PMAA_028640
N
0.806
HCAG_03640
Histoplasma capsulatum
HCAG_03640
N
0.790
BDBG_05401
Blastomyces dermatitidis
BDBG_05401
N
0.783
ACLA_068230
Aspergillus clavatus
CADACLAG00007015
N
0.780
ANIA_10941
Aspergillus nidulans
CADANIAG00000536
N
0.775
NFIA_082870
Neosartorya fischeri
CADNFIAG00006872
N
0.773
AFLA_130230
Aspergillus flavus
CADAFLAG00010081
N
0.768
AO090001000725
Aspergillus oryzae
CADAORAG00000662
N
0.768
AFUA_2G06090
Aspergillus fumigatus
CADAFUAG00003703
N
0.765
UREG_00938
Uncinocarpus reesii
UREG_00938
N
0.761
ATEG_06805
Aspergillus terreus
CADATEAG00006229
N
0.761
CIMG_00990
Coccidioides immitis
CIMG_00990
N
0.761
CPSG_02224
Coccidioides posadasii
CPSG_02224
N
0.761
MGYG_08958
Microsporum gypseum
MGYG_08958
N
0.756
gw1.6.1353.1
Mycosphaerella graminicola
gw1.6.1353.1
N
0.742
SS1G_05220
Sclerotinia sclerotiorum
SS1G_05220
N
0.739
An02g14690
Aspergillus niger
CADANGAG00002994
N
0.739
fgenesh1_pg.00082_#_116
Aspergillus carbonarius
fgenesh1_pg.00082_#_116
N
0.737
Pc22g08010
Penicillium chrysogenum
Pc22g08010
N
0.725
BC1G_12993
Botrytis cinerea
BC1G_12993
N
0.717
estExt_Genewise1Plus.C_500038
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_500038
N
0.714
NCU12158
Neurospora crassa
NCU12158
N
0.703
estExt_fgenesh3_pm.C_10926
Neurospora discreta
estExt_fgenesh3_pm.C_10926
N
0.703
MGG_06881
Magnaporthe oryzae
MGG_06881
N
0.703
estExt_fgenesh1_pg.C_10265
Neurospora tetrasperma
estExt_fgenesh1_pg.C_10265
N
0.703