CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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orf19.581
(
Candida albicans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
orf19.581
T29887_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
orf19.581
RRM
435
493
LFLGGVPRNMDERSLAQVLRPYAEIQSVILNSEKKHAFVKVYSRREAEQVITSFNKDGA
Links
Other
RRM
family RBPs
Other
Candida albicans
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Cd36_51490
Candida dubliniensis
Cd36_51490
N
1.000
CTRG_05353
Candida tropicalis
CTRG_05353
N
0.983
DEHA0E12364g
Debaryomyces hansenii
DEHA0E12364g
N
0.867
CLUG_00870
Candida lusitaniae
CLUG_00870
N
0.831
CPAG_03345
Candida parapsilosis
CPAG_03345
N
0.794
19777_Multiple
Saccharomyces bayanus
19777_Multiple
N
0.729
NRD1
Saccharomyces cerevisiae
YNL251C
N
0.712
18402_YNL251C
Saccharomyces paradoxus
18402_YNL251C
N
0.712