CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSTUMT00002378001
(
Tuber melanosporum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
GSTUMT00002378001
T56920_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSTUMT00002378001
RRM
140
212
VYITNLPPDTTEDEVNKVFSRFGVIAEEIDRGKPRIKLYRNEDGSVKGDALVVYFRPESVNLAVQMLDDSDFR
GSTUMT00002378001
RRM
302
358
LKEDIREECEKLGDVTNVVLYDKEEDGIVSVRFANAESAKACVGVMHGRFFDGQRVE
Links
Other
RRM
family RBPs
Other
Tuber melanosporum
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HCAG_01782
Histoplasma capsulatum
HCAG_01782
N
0.723
ANIA_01188
Aspergillus nidulans
CADANIAG00001437
N
0.715
PABG_00485
Paracoccidioides brasiliensis
PABG_00485
N
0.715
SS1G_06737
Sclerotinia sclerotiorum
SS1G_06737
N
0.702
ACLA_024590
Aspergillus clavatus
CADACLAG00002524
N
0.700
MGYG_04491
Microsporum gypseum
MGYG_04491
N
0.700
UREG_05919
Uncinocarpus reesii
UREG_05919
N
0.700
TESG_05610
Trichophyton tonsurans
TESG_05610
N
0.700
TERG_07903
Trichophyton rubrum
TERG_07903
N
0.700
ARB_02854
Arthroderma benhamiae
ARB_02854
N
0.700