CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_04491
(
Microsporum gypseum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGYG_04491
T29822_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_04491T0
RRM
111
184
VYVTAIPLDATVSEISALFSKCGVIAEEIDSGKPRIKMYTDDQGAFKGDALVVYFRPESVNLAIQMLDDTDFRF
MGYG_04491T0
RRM
273
328
KEDIREECSKLGEVTNVVLYDKEESGIATVRFADPECAQACVQMMNGRFFGGTQVE
Links
Other
RRM
family RBPs
Other
Microsporum gypseum
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TERG_07903
Trichophyton rubrum
TERG_07903
N
0.977
ARB_02854
Arthroderma benhamiae
ARB_02854
N
0.969
TESG_05610
Trichophyton tonsurans
TESG_05610
N
0.962
MCYG_01582
Microsporum canis
MCYG_01582
N
0.915
TRV_05547
Trichophyton verrucosum
TRV_05547
N
0.862
UREG_05919
Uncinocarpus reesii
UREG_05919
N
0.838
CPSG_09587
Coccidioides posadasii
CPSG_09587
N
0.831
CIMG_06929
Coccidioides immitis
CIMG_06929
N
0.831
ANIA_01188
Aspergillus nidulans
CADANIAG00001437
N
0.800
HCAG_01782
Histoplasma capsulatum
HCAG_01782
N
0.800
PABG_00485
Paracoccidioides brasiliensis
PABG_00485
N
0.785
BDBG_00241
Blastomyces dermatitidis
BDBG_00241
N
0.777
ACLA_024590
Aspergillus clavatus
CADACLAG00002524
N
0.769
ATEG_00286
Aspergillus terreus
CADATEAG00009538
N
0.769
An08g03180
Aspergillus niger
CADANGAG00006637
N
0.762
AO090038000318
Aspergillus oryzae
CADAORAG00009105
N
0.754
AFLA_068630
Aspergillus flavus
CADAFLAG00008287
N
0.754
e_gw1.00083.460.1
Aspergillus carbonarius
e_gw1.00083.460.1
N
0.754
NFIA_014720
Neosartorya fischeri
CADNFIAG00001794
N
0.746
PMAA_042630
Penicillium marneffei
PMAA_042630
N
0.746
AFUA_1G10920
Aspergillus fumigatus
CADAFUAG00007692
N
0.746
SS1G_06737
Sclerotinia sclerotiorum
SS1G_06737
N
0.702
e_gw1.4.1880.1
Thielavia terrestris
e_gw1.4.1880.1
N
0.702
GSTUMT00002378001
Tuber melanosporum
GSTUMT00002378001
N
0.700