CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL005049
(
Aedes aegypti
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAEL005049
T32341_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL005049-PA
RRM
29
98
LFVGGLSKETTEQDLRNHFGQYGEIESVNVKTDPQTGRSRGFAFIIFNSPESIDKVVAFEDHTVNGKKVD
AAEL005049-PA
RRM
109
178
IFVGGLSPETSDEEVKTFFEQFGNVVEMEMPFDKMKNQRKGFCFITYDSEAVVTELLKTPKQTVGGKEVD
Links
Other
RRM
family RBPs
Other
Aedes aegypti
RBPs
18 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL005515
Aedes aegypti
AAEL005515
N
0.771
GM25920
Drosophila sechellia
FBgn0180776
N
0.757
sqd
Drosophila melanogaster
FBgn0086897
N
0.757
AGAP006668
Anopheles gambiae
AGAP006668
N
0.757
GG17035
Drosophila erecta
FBgn0109263
N
0.757
GD20486
Drosophila simulans
FBgn0191957
N
0.750
CpipJ_CPIJ011536
Culex pipiens
CpipJ_CPIJ011536
N
0.750
AGAP000399
Anopheles gambiae
AGAP000399
N
0.750
CPIJ011536
Culex quinquefasciatus
CPIJ011536
N
0.750
GE24428
Drosophila yakuba
FBgn0241545
N
0.750
GH19060
Drosophila grimshawi
FBgn0126527
N
0.743
GA14206-RA
Drosophila pseudoobscura
FBgn0074235
N
0.743
GI10695
Drosophila mojavensis
FBgn0133459
N
0.743
GF17370
Drosophila ananassae
FBgn0094388
N
0.743
GJ23113
Drosophila virilis
FBgn0210215
N
0.736
BGIBMGA013464
Bombyx mori
BGIBMGA013464
N
0.736
amel4_ncbi_hmm2459
Apis mellifera
amel4_ncbi_hmm2459
N
0.729
GK13337
Drosophila willistoni
FBgn0215346
N
0.729