CpipJ_CPIJ011536 (Culex pipiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CpipJ_CPIJ011536 T28959_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ011536-RA RRM 42 111
CpipJ_CPIJ011536-RA RRM 122 191

Links

Other RRM family RBPs
Other Culex pipiens RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CPIJ011536 Culex quinquefasciatus CPIJ011536 N 1.000
AAEL005515 Aedes aegypti AAEL005515 N 0.979
AGAP000399 Anopheles gambiae AGAP000399 N 0.950
AGAP006668 Anopheles gambiae AGAP006668 N 0.864
amel4_ncbi_hmm2459 Apis mellifera amel4_ncbi_hmm2459 N 0.850
BGIBMGA013464 Bombyx mori BGIBMGA013464 N 0.814
sqd Drosophila melanogaster FBgn0086897 N 0.814
GG17035 Drosophila erecta FBgn0109263 N 0.814
nasonia_NCBI_hmm138813 Nasonia vitripennis nasonia_NCBI_hmm138813 N 0.814
GA14206-RA Drosophila pseudoobscura FBgn0074235 N 0.807
GE24428 Drosophila yakuba FBgn0241545 N 0.800
GM25920 Drosophila sechellia FBgn0180776 N 0.800
GD20486 Drosophila simulans FBgn0191957 N 0.793
GK13337 Drosophila willistoni FBgn0215346 N 0.793
GF17370 Drosophila ananassae FBgn0094388 N 0.793
GI10695 Drosophila mojavensis FBgn0133459 N 0.793
GJ23113 Drosophila virilis FBgn0210215 N 0.786
GH19060 Drosophila grimshawi FBgn0126527 N 0.786
AAEL005049 Aedes aegypti AAEL005049 N 0.750
GL23974 Drosophila persimilis FBgn0161564 N 0.750
PHUM596900 Pediculus humanus PHUM596900 N 0.729
estExt_fgenesh1_pm.C_1020006 Daphnia pulex estExt_fgenesh1_pm.C_1020006 N 0.700