CBN09445 (Caenorhabditis brenneri)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CBN09445 T34014_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
asd-1
M171_0.6 		Caenorhabditis elegans WGCAUGH RNAcompete
Ray et al.(2013)
RNCMPT00180 		0.841
fox-1
M017_0.6 		Caenorhabditis elegans WGCAUGM RNAcompete
Ray et al.(2013)
RNCMPT00017 		0.754
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CBN09445 RRM 132 200

Links

Other RRM family RBPs
Other Caenorhabditis brenneri RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG20166 Caenorhabditis briggsae CBG20166 I 0.899
CRE06934 Caenorhabditis remanei CRE06934 I 0.841
asd-1 Caenorhabditis elegans R74.5 D 0.841
CJA17900 Caenorhabditis japonica CJA17900 I 0.768
CBN11651 Caenorhabditis brenneri CBN11651 I 0.768
CJA09998 Caenorhabditis japonica CJA09998 I 0.768
CBG02108 Caenorhabditis briggsae CBG02108 I 0.754
WUBG_05352 Wuchereria bancrofti WUBG_05352 I 0.754
Bm1_08900 Brugia malayi Bm1_08900 I 0.754
CRE07377 Caenorhabditis remanei CRE07377 I 0.754
fox-1 Caenorhabditis elegans T07D1.4 D 0.754
LOAG_04679 Loa loa LOAG_04679 I 0.754