CJA16600 (Caenorhabditis japonica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CJA16600 T34159_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CJA16600 RRM 57 127
CJA16600 RRM 145 214
CJA16600 RRM 238 307
CJA16600 RRM 343 412

Links

Other RRM family RBPs
Other Caenorhabditis japonica RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CRE22405 Caenorhabditis remanei CRE22405 N 0.879
CBG07431 Caenorhabditis briggsae CBG07431 N 0.868
CBN18184 Caenorhabditis brenneri CBN18184 N 0.865
pab-2 Caenorhabditis elegans F18H3.3 N 0.861
pab-1 Caenorhabditis elegans Y106G6H.2 I 0.744
CJA17800 Caenorhabditis japonica CJA17800 N 0.733
CBN04295 Caenorhabditis brenneri CBN04295 I 0.733
CBG02207 Caenorhabditis briggsae CBG02207 N 0.730