CJA17800 (Caenorhabditis japonica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CJA17800 T34174_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CJA17800 RRM 29 99
CJA17800 RRM 117 186
CJA17800 RRM 210 278
CJA17800 RRM 314 383

Links

Other RRM family RBPs
Other Caenorhabditis japonica RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBN04295 Caenorhabditis brenneri CBN04295 I 0.900
CBG02207 Caenorhabditis briggsae CBG02207 N 0.893
pab-1 Caenorhabditis elegans Y106G6H.2 I 0.889
pab-2 Caenorhabditis elegans F18H3.3 N 0.765
LOAG_01058 Loa loa LOAG_01058 I 0.758
CBG07431 Caenorhabditis briggsae CBG07431 N 0.758
CRE22405 Caenorhabditis remanei CRE22405 N 0.758
Bm1_16080 Brugia malayi Bm1_16080 I 0.758
Bm1_06880 Brugia malayi Bm1_06880 I 0.754
CBN18184 Caenorhabditis brenneri CBN18184 N 0.751
CJA16600 Caenorhabditis japonica CJA16600 N 0.733
ISCW014211 Ixodes scapularis ISCW014211 I 0.712
GH21052 Drosophila grimshawi FBgn0128514 I 0.709
GK19652 Drosophila willistoni FBgn0221650 I 0.709
GI18654 Drosophila mojavensis FBgn0141393 I 0.706
GJ21671 Drosophila virilis FBgn0208790 I 0.706