ENSBTAG00000021755 (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000021755 T34922_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.746
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.746
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.746
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.725
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000028998 RRM 15 83
ENSBTAP00000028998 RRM 105 171

Links

Other RRM family RBPs
Other Bos taurus RBPs

74 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.754
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.724
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.724
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.724
HNRNPA1 Homo sapiens ENSG00000135486 D 0.724
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.724
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.724
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.724
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.724
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.724
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.724
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.724
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.724
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.724
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.724
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.724
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.724
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.724
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.724
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.724
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.724
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.724
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.724
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.724
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.724
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.724
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.724
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.724
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.724
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.724
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.724
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.724
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.717
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.717
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.717
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.717
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.717
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.717
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.717
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.717
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.717
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.717
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.717
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.717
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.716
LOC100054206 Equus caballus ENSECAG00000006699 I 0.715
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.714
ENSOGAG00000017179 Otolemur garnettii ENSOGAG00000017179 I 0.712
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.712
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.710
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.710
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.710
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.710
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.710
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.710
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.710
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.710
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.710
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.710
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.709
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.708
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.708
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.707
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.707
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.703
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.703
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.703
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.703
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.703
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.703
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.703
LOC785445 Bos taurus ENSBTAG00000025621 I 0.703
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.701
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.700