ENSOGAG00000017179 (Otolemur garnettii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOGAG00000017179 T39921_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.831
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.831
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.831
HNRNPA1L2
M023_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00023 		0.817
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000015389 RRM 16 85
ENSOGAP00000015389 RRM 107 174

Links

Other RRM family RBPs
Other Otolemur garnettii RBPs

234 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.793
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.793
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.793
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.793
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.793
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.793
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.793
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.793
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.793
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.793
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.793
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.793
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.793
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.793
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.793
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.793
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.793
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.793
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.793
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.793
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.793
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.793
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.793
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.793
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.793
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.793
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.793
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.793
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.793
HNRNPA1 Homo sapiens ENSG00000135486 D 0.793
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.793
ENSCAFG00000017316 Canis familiaris ENSCAFG00000017316 I 0.789
ENSMMUG00000022448 Macaca mulatta ENSMMUG00000022448 I 0.787
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.786
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.786
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.786
ENSLAFG00000030769 Loxodonta africana ENSLAFG00000030769 I 0.786
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.786
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.786
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.786
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.786
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.786
XR_011984.1 Macaca mulatta ENSMMUG00000011640 I 0.786
ENSCAFG00000006036 Canis familiaris ENSCAFG00000006036 I 0.786
ENSCAFG00000015319 Canis familiaris ENSCAFG00000015319 I 0.785
XM_844664.1 Canis familiaris ENSCAFG00000000687 I 0.782
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.779
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.779
XM_852631.1 Canis familiaris ENSCAFG00000023680 I 0.779
HNRNPA1L2 Homo sapiens ENSG00000139675 D 0.779
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.779
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.779
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.779
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.779
LOC100413454 Callithrix jacchus ENSCJAG00000009030 I 0.779
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.779
ENSCAFG00000008379 Canis familiaris ENSCAFG00000008379 I 0.779
ENSCAFG00000019118 Canis familiaris ENSCAFG00000019118 I 0.778
XM_854536.1 Canis familiaris ENSCAFG00000005046 I 0.772
LOC710473 Macaca mulatta ENSMMUG00000007928 I 0.772
ENSCJAG00000031552 Callithrix jacchus ENSCJAG00000031552 I 0.772
ENSPPYG00000017853 Pongo pygmaeus ENSPPYG00000017853 I 0.772
ENSCAFG00000006784 Canis familiaris ENSCAFG00000006784 I 0.772
ENSMMUG00000008337 Macaca mulatta ENSMMUG00000008337 I 0.771
ENSCJAG00000009723 Callithrix jacchus ENSCJAG00000009723 I 0.771
ENSCAFG00000018456 Canis familiaris ENSCAFG00000018456 I 0.768
ENSOCUG00000022668 Oryctolagus cuniculus ENSOCUG00000022668 I 0.766
ENSEEUG00000000494 Erinaceus europaeus ENSEEUG00000000494 I 0.766
ENSCPOG00000021077 Cavia porcellus ENSCPOG00000021077 I 0.766
ENSMUSG00000021927 Mus musculus ENSMUSG00000021927 I 0.766
ENSTBEG00000016272 Tupaia belangeri ENSTBEG00000016272 I 0.766
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.766
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.766
LOC785445 Bos taurus ENSBTAG00000025621 I 0.766
ENSOCUG00000021006 Oryctolagus cuniculus ENSOCUG00000021006 I 0.766
ENSCAFG00000013303 Canis familiaris ENSCAFG00000013303 I 0.764
ENSCAFG00000014691 Canis familiaris ENSCAFG00000014691 I 0.764
ENSMMUG00000004528 Macaca mulatta ENSMMUG00000004528 I 0.764
ENSPPYG00000003855 Pongo pygmaeus ENSPPYG00000003855 I 0.764
ENSCAFG00000011035 Canis familiaris ENSCAFG00000011035 I 0.764
ENSCJAG00000001353 Callithrix jacchus ENSCJAG00000001353 I 0.764
ENSCAFG00000001973 Canis familiaris ENSCAFG00000001973 I 0.764
ENSCAFG00000020238 Canis familiaris ENSCAFG00000020238 I 0.764
ENSCJAG00000005407 Callithrix jacchus ENSCJAG00000005407 I 0.761
ENSMGAG00000007630 Meleagris gallopavo ENSMGAG00000007630 I 0.760
ENSCJAG00000000095 Callithrix jacchus ENSCJAG00000000095 I 0.759
ENSCJAG00000032417 Callithrix jacchus ENSCJAG00000032417 I 0.759
ENSCAFG00000024951 Canis familiaris ENSCAFG00000024951 I 0.759
ENSCAFG00000005164 Canis familiaris ENSCAFG00000005164 I 0.759
ENSTBEG00000012511 Tupaia belangeri ENSTBEG00000012511 I 0.759
ENSCAFG00000002059 Canis familiaris ENSCAFG00000002059 I 0.759
ENSRNOG00000033182 Rattus norvegicus ENSRNOG00000033182 I 0.759
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.759
ENSRNOG00000005951 Rattus norvegicus ENSRNOG00000005951 I 0.759
ENSCAFG00000017494 Canis familiaris ENSCAFG00000017494 I 0.757
ENSCAFG00000018186 Canis familiaris ENSCAFG00000018186 I 0.757
LOC100054206 Equus caballus ENSECAG00000006699 I 0.757
ENSCAFG00000023056 Canis familiaris ENSCAFG00000023056 I 0.755
ENSSARG00000008946 Sorex araneus ENSSARG00000008946 I 0.754
ENSCAFG00000006663 Canis familiaris ENSCAFG00000006663 I 0.754
Hnrnpa1 Dipodomys ordii ENSDORG00000010628 I 0.754
ENSMMUG00000013424 Macaca mulatta ENSMMUG00000013424 I 0.754
ENSMODG00000006291 Monodelphis domestica ENSMODG00000006291 I 0.753
ENSMMUG00000031948 Macaca mulatta ENSMMUG00000031948 I 0.752
ENSMMUG00000004182 Macaca mulatta ENSMMUG00000004182 I 0.752
D4A2D2_RAT Rattus norvegicus ENSRNOG00000021986 I 0.752
ENSCJAG00000005326 Callithrix jacchus ENSCJAG00000005326 I 0.750
ENSCAFG00000024636 Canis familiaris ENSCAFG00000024636 I 0.750
ENSCJAG00000035202 Callithrix jacchus ENSCJAG00000035202 I 0.750
D4AD23_RAT Rattus norvegicus ENSRNOG00000025891 I 0.750
ENSCAFG00000019104 Canis familiaris ENSCAFG00000019104 I 0.750
ENSCAFG00000004202 Canis familiaris ENSCAFG00000004202 I 0.750
ENSCAFG00000019097 Canis familiaris ENSCAFG00000019097 I 0.750
ENSMLUG00000000788 Myotis lucifugus ENSMLUG00000000788 I 0.750
ENSETEG00000018059 Echinops telfairi ENSETEG00000018059 I 0.748
ENSCJAG00000007634 Callithrix jacchus ENSCJAG00000007634 I 0.746
ENSCJAG00000010169 Callithrix jacchus ENSCJAG00000010169 I 0.745
ENSCJAG00000004902 Callithrix jacchus ENSCJAG00000004902 I 0.745
ENSCAFG00000005308 Canis familiaris ENSCAFG00000005308 I 0.745
XM_855847.1 Canis familiaris ENSCAFG00000006327 I 0.745
ENSG00000231942 Homo sapiens ENSG00000231942 I 0.743
ENSBTAG00000009937 Bos taurus ENSBTAG00000009937 I 0.741
ENSCAFG00000003418 Canis familiaris ENSCAFG00000003418 I 0.739
hnrnpa1 Xenopus tropicalis ENSXETG00000021277 I 0.738
ENSCJAG00000016375 Callithrix jacchus ENSCJAG00000016375 I 0.738
ENSCAFG00000007879 Canis familiaris ENSCAFG00000007879 I 0.738
AAH45260 Xenopus laevis AAH45260 I 0.738
ENSGGOG00000025827 Gorilla gorilla ENSGGOG00000025827 I 0.738
XM_543834.2 Canis familiaris ENSCAFG00000002157 I 0.736
XR_010472.1 Macaca mulatta ENSMMUG00000012991 I 0.736
ENSCAFG00000003493 Canis familiaris ENSCAFG00000003493 I 0.736
ENSMMUG00000005750 Macaca mulatta ENSMMUG00000005750 I 0.736
ENSCAFG00000009606 Canis familiaris ENSCAFG00000009606 I 0.736
XP_848548.1 Canis familiaris ENSCAFG00000016313 I 0.731
XP_541811.1 Canis familiaris ENSCAFG00000006586 I 0.731
ENSRNOG00000011100 Rattus norvegicus ENSRNOG00000011100 I 0.731
ENSOCUG00000022627 Oryctolagus cuniculus ENSOCUG00000022627 I 0.731
ENSCJAG00000020672 Callithrix jacchus ENSCJAG00000020672 I 0.731
AAA49741 Xenopus laevis AAA49741 I 0.731
AAH72090 Xenopus laevis AAH72090 I 0.731
ENSCJAG00000007250 Callithrix jacchus ENSCJAG00000007250 I 0.731
CBU92546 Xenopus laevis CBU92546 I 0.731
CBF67555 Xenopus laevis CBF67555 I 0.731
CBF67672 Xenopus laevis CBF67672 I 0.731
ENSGGOG00000027879 Gorilla gorilla ENSGGOG00000027879 I 0.731
P17130 Xenopus laevis P17130 I 0.731
CBU92428 Xenopus laevis CBU92428 I 0.731
AAA49742 Xenopus laevis AAA49742 I 0.731
ENSMMUG00000007695 Macaca mulatta ENSMMUG00000007695 I 0.731
LOC100397230 Callithrix jacchus ENSCJAG00000014791 I 0.731
ENSCAFG00000009412 Canis familiaris ENSCAFG00000009412 I 0.730
ENSCAFG00000014094 Canis familiaris ENSCAFG00000014094 I 0.729
XM_001106745.1 Macaca mulatta ENSMMUG00000031809 I 0.729
ENSCJAG00000001302 Callithrix jacchus ENSCJAG00000001302 I 0.729
ENSMODG00000023422 Monodelphis domestica ENSMODG00000023422 I 0.729
ENSGGOG00000024290 Gorilla gorilla ENSGGOG00000024290 I 0.729
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.729
ENSRNOG00000029434 Rattus norvegicus ENSRNOG00000029434 I 0.727
ENSCAFG00000025274 Canis familiaris ENSCAFG00000025274 I 0.724
ENSCJAG00000033784 Callithrix jacchus ENSCJAG00000033784 I 0.724
ENSRNOG00000021280 Rattus norvegicus ENSRNOG00000021280 I 0.724
ENSSTOG00000015259 Spermophilus tridecemlineatus ENSSTOG00000015259 I 0.724
ENSCAFG00000005207 Canis familiaris ENSCAFG00000005207 I 0.724
ENSETEG00000001872 Echinops telfairi ENSETEG00000001872 I 0.724
ENSOGAG00000002398 Otolemur garnettii ENSOGAG00000002398 I 0.723
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.721
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.721
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.721
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.721
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.721
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.721
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.721
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.721
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.721
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.721
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.721
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.721
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.721
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.721
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.721
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.721
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.721
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.721
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.721
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.721
LOC100068539 Equus caballus ENSECAG00000000782 I 0.721
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.721
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.721
ENSCJAG00000015222 Callithrix jacchus ENSCJAG00000015222 I 0.721
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.721
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.721
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.721
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.721
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.721
ENSCAFG00000000746 Canis familiaris ENSCAFG00000000746 I 0.720
D4ABW2_RAT Rattus norvegicus ENSRNOG00000032168 I 0.718
Ame_R018030 Ailuropoda melanoleuca Ame_R018030 I 0.717
ENSETEG00000015332 Echinops telfairi ENSETEG00000015332 I 0.717
ENSGACG00000009435 Gasterosteus aculeatus ENSGACG00000009435 I 0.717
ENSCAFG00000007198 Canis familiaris ENSCAFG00000007198 I 0.717
ENSMICG00000012083 Microcebus murinus ENSMICG00000012083 I 0.716
ENSMICG00000009289 Microcebus murinus ENSMICG00000009289 I 0.715
ENSCAFG00000024824 Canis familiaris ENSCAFG00000024824 I 0.715
AAA49948 Xenopus laevis AAA49948 I 0.714
HNRNPA2B1 Anolis carolinensis ENSACAG00000012992 I 0.714
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.714
ENSGGOG00000027762 Gorilla gorilla ENSGGOG00000027762 I 0.714
AAH46692 Xenopus laevis AAH46692 I 0.714
ENSCAFG00000018580 Canis familiaris ENSCAFG00000018580 I 0.714
P51989 Xenopus laevis P51989 I 0.714
CBU92450 Xenopus laevis CBU92450 I 0.714
CBF67577 Xenopus laevis CBF67577 I 0.714
ENSCAFG00000007918 Canis familiaris ENSCAFG00000007918 I 0.713
ENSPCAG00000001867 Procavia capensis ENSPCAG00000001867 I 0.713
ENSBTAG00000021755 Bos taurus ENSBTAG00000021755 I 0.712
ENSCJAG00000017130 Callithrix jacchus ENSCJAG00000017130 I 0.710
ENSLAFG00000029171 Loxodonta africana ENSLAFG00000029171 I 0.710
ENSGGOG00000022797 Gorilla gorilla ENSGGOG00000022797 I 0.709
ENSSSCG00000015836 Sus scrofa ENSSSCG00000015836 I 0.707
ENSCAFG00000003921 Canis familiaris ENSCAFG00000003921 I 0.707
ENSCJAG00000034783 Callithrix jacchus ENSCJAG00000034783 I 0.707
P51990 Xenopus laevis P51990 I 0.707
ENSCAFG00000005307 Canis familiaris ENSCAFG00000005307 I 0.707
AAH43750 Xenopus laevis AAH43750 I 0.707
AAI06633 Xenopus laevis AAI06633 I 0.707
AAB59951 Xenopus laevis AAB59951 I 0.707
hnrnpa2b1 Xenopus tropicalis ENSXETG00000012170 I 0.707
ENSCJAG00000032970 Callithrix jacchus ENSCJAG00000032970 I 0.703
ENSGGOG00000025265 Gorilla gorilla ENSGGOG00000025265 I 0.703
ENSCAFG00000008301 Canis familiaris ENSCAFG00000008301 I 0.703
hnrnpa3 Xenopus tropicalis ENSXETG00000001806 I 0.703
ENSORLG00000008001 Oryzias latipes ENSORLG00000008001 I 0.703
ENSMMUG00000022219 Macaca mulatta ENSMMUG00000022219 I 0.702
ENSMODG00000002376 Monodelphis domestica ENSMODG00000002376 I 0.702