CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPH3
(
Choloepus hoffmanni
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCHOG00000012954
T35339_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000011479
RRM
4
49
VPNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIE
ENSCHOP00000011479
RRM
157
224
VHMRGLPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIE
Links
Other
RRM
family RBPs
Other
Choloepus hoffmanni
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPH1
Ochotona princeps
ENSOPRG00000003513
N
0.868
HNRNPH3
Microcebus murinus
ENSMICG00000007581
N
0.851
Hnrnph3
Mus musculus
ENSMUSG00000020069
N
0.826
HNRNPH3
Monodelphis domestica
ENSMODG00000017283
N
0.826
HNRNPH3
Sus scrofa
ENSSSCG00000010238
N
0.826
HNRNPH3
Macaca mulatta
ENSMMUG00000009792
N
0.826
HNRNPH3
Ornithorhynchus anatinus
ENSOANG00000002260
N
0.826
HNRNPH3
Oryctolagus cuniculus
ENSOCUG00000004443
N
0.826
ENSPPYG00000002397
Pongo pygmaeus
ENSPPYG00000002397
N
0.826
HNRNPH3
Pteropus vampyrus
ENSPVAG00000008037
N
0.826
Hnrnph3
Rattus norvegicus
ENSRNOG00000026849
N
0.826
LOC100392844
Callithrix jacchus
ENSCJAG00000019154
N
0.826
HNRNPH3
Myotis lucifugus
ENSMLUG00000000143
N
0.826
HNRNPH3
Pan troglodytes
ENSPTRG00000002553
N
0.826
Ame_R001515
Ailuropoda melanoleuca
Ame_R001515
N
0.826
HNRNPH3
Bos taurus
ENSBTAG00000014316
N
0.826
LOC100063127
Equus caballus
ENSECAG00000007190
N
0.826
HNRNPH3
Canis familiaris
ENSCAFG00000013619
N
0.826
HNRNPH3
Homo sapiens
ENSG00000096746
N
0.826
HNRNPH3
Vicugna pacos
ENSVPAG00000011814
N
0.826
HNRNPH3
Tursiops truncatus
ENSTTRG00000013322
N
0.826
HNRNPH3
Loxodonta africana
ENSLAFG00000012955
N
0.826
HNRNPH3
Cavia porcellus
ENSCPOG00000006397
N
0.826
HNRNPH3
Gorilla gorilla
ENSGGOG00000025378
N
0.826
HNRNPH3
Spermophilus tridecemlineatus
ENSSTOG00000011676
N
0.826
HNRNPH3
Sorex araneus
ENSSARG00000013863
N
0.819
HNRNPH3
Ochotona princeps
ENSOPRG00000014850
N
0.819
HNRNPH3
Macropus eugenii
ENSMEUG00000013139
N
0.819
Q5F3D2_CHICK
Gallus gallus
ENSGALG00000003947
N
0.812
HNRNPH3
Taeniopygia guttata
ENSTGUG00000003609
N
0.812
LOC100407750
Callithrix jacchus
ENSCJAG00000022707
N
0.804
HNRNPH3
Procavia capensis
ENSPCAG00000000111
N
0.797
HNRNPH3
Anolis carolinensis
ENSACAG00000010365
N
0.797
HNRNPH3
Tarsius syrichta
ENSTSYG00000005319
N
0.797
HNRNPH3
Erinaceus europaeus
ENSEEUG00000005025
N
0.790
hnrnph3
Xenopus tropicalis
ENSXETG00000023567
N
0.790
AAH82630
Xenopus laevis
AAH82630
N
0.783
HNRNPH3
Meleagris gallopavo
ENSMGAG00000003795
N
0.768
hnrnph1l
Danio rerio
ENSDARG00000005551
I
0.735
HNRNPH3
Tupaia belangeri
ENSTBEG00000006114
N
0.725
HNRNPH1
Canis familiaris
ENSCAFG00000000336
I
0.717
HNRNPH1
Procavia capensis
ENSPCAG00000006715
N
0.717
HNRNPH1
Macaca mulatta
ENSMMUG00000010843
N
0.717
ENSEEUG00000013364
Erinaceus europaeus
ENSEEUG00000013364
N
0.717