CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPH3
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000003795
T38342_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000003541
RRM
20
89
VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTLDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIE
ENSMGAP00000003541
RRM
180
243
EXPFRATENDIANFFSPLNPIRVHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNHMQHRYIE
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPH3
Taeniopygia guttata
ENSTGUG00000003609
N
0.957
Q5F3D2_CHICK
Gallus gallus
ENSGALG00000003947
N
0.957
HNRNPH3
Anolis carolinensis
ENSACAG00000010365
N
0.942
HNRNPH3
Bos taurus
ENSBTAG00000014316
N
0.942
Ame_R001515
Ailuropoda melanoleuca
Ame_R001515
N
0.942
HNRNPH3
Vicugna pacos
ENSVPAG00000011814
N
0.942
HNRNPH3
Canis familiaris
ENSCAFG00000013619
N
0.942
HNRNPH3
Spermophilus tridecemlineatus
ENSSTOG00000011676
N
0.942
LOC100392844
Callithrix jacchus
ENSCJAG00000019154
N
0.942
HNRNPH3
Gorilla gorilla
ENSGGOG00000025378
N
0.942
HNRNPH3
Loxodonta africana
ENSLAFG00000012955
N
0.942
HNRNPH3
Homo sapiens
ENSG00000096746
N
0.942
LOC100063127
Equus caballus
ENSECAG00000007190
N
0.942
HNRNPH3
Cavia porcellus
ENSCPOG00000006397
N
0.942
HNRNPH3
Sus scrofa
ENSSSCG00000010238
N
0.942
HNRNPH3
Tursiops truncatus
ENSTTRG00000013322
N
0.942
Hnrnph3
Mus musculus
ENSMUSG00000020069
N
0.942
HNRNPH3
Macaca mulatta
ENSMMUG00000009792
N
0.942
HNRNPH3
Myotis lucifugus
ENSMLUG00000000143
N
0.942
ENSPPYG00000002397
Pongo pygmaeus
ENSPPYG00000002397
N
0.942
HNRNPH3
Oryctolagus cuniculus
ENSOCUG00000004443
N
0.942
HNRNPH3
Pteropus vampyrus
ENSPVAG00000008037
N
0.942
Hnrnph3
Rattus norvegicus
ENSRNOG00000026849
N
0.942
HNRNPH3
Pan troglodytes
ENSPTRG00000002553
N
0.942
HNRNPH3
Sorex araneus
ENSSARG00000013863
N
0.935
HNRNPH3
Monodelphis domestica
ENSMODG00000017283
N
0.935
HNRNPH3
Ochotona princeps
ENSOPRG00000014850
N
0.935
HNRNPH3
Ornithorhynchus anatinus
ENSOANG00000002260
N
0.935
HNRNPH3
Macropus eugenii
ENSMEUG00000013139
N
0.928
LOC100407750
Callithrix jacchus
ENSCJAG00000022707
N
0.920
HNRNPH3
Procavia capensis
ENSPCAG00000000111
N
0.913
hnrnph3
Xenopus tropicalis
ENSXETG00000023567
N
0.899
HNRNPH3
Erinaceus europaeus
ENSEEUG00000005025
N
0.899
AAH82630
Xenopus laevis
AAH82630
N
0.891
HNRNPH3
Tupaia belangeri
ENSTBEG00000006114
N
0.868
HNRNPH1
Macaca mulatta
ENSMMUG00000010843
N
0.833
HNRNPH1
Procavia capensis
ENSPCAG00000006715
N
0.833
HNRNPH1
Canis familiaris
ENSCAFG00000000336
I
0.833
ENSEEUG00000013364
Erinaceus europaeus
ENSEEUG00000013364
N
0.833
HNRNPF
Callithrix jacchus
ENSCJAG00000016238
I
0.790
HNRNPH3
Choloepus hoffmanni
ENSCHOG00000012954
N
0.768
ENSMICG00000016899
Microcebus murinus
ENSMICG00000016899
N
0.732
HNRNPH3
Dasypus novemcinctus
ENSDNOG00000004881
N
0.710
HNRNPH3
Microcebus murinus
ENSMICG00000007581
N
0.704