CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPH1
(
Ochotona princeps
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOPRG00000003513
T39949_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000003228
RRM
4
49
VPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIE
ENSOPRP00000003228
RRM
158
225
VHMRGLPYRATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVEFATHEDAVAAMSKDKANMQHRYVE
Links
Other
RRM
family RBPs
Other
Ochotona princeps
RBPs
42 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPH3
Choloepus hoffmanni
ENSCHOG00000012954
N
0.868
hnrnph1l
Danio rerio
ENSDARG00000005551
I
0.848
ENSEEUG00000013364
Erinaceus europaeus
ENSEEUG00000013364
N
0.826
HNRNPH1
Macaca mulatta
ENSMMUG00000010843
N
0.826
HNRNPH1
Procavia capensis
ENSPCAG00000006715
N
0.826
HNRNPH1
Canis familiaris
ENSCAFG00000000336
I
0.826
HNRNPH1
Microcebus murinus
ENSMICG00000000207
N
0.807
HNRNPF
Callithrix jacchus
ENSCJAG00000016238
I
0.754
HNRNPH3
Microcebus murinus
ENSMICG00000007581
N
0.737
HNRNPH3
Loxodonta africana
ENSLAFG00000012955
N
0.717
HNRNPH3
Pan troglodytes
ENSPTRG00000002553
N
0.717
HNRNPH3
Gorilla gorilla
ENSGGOG00000025378
N
0.717
HNRNPH3
Homo sapiens
ENSG00000096746
N
0.717
LOC100063127
Equus caballus
ENSECAG00000007190
N
0.717
HNRNPH3
Pteropus vampyrus
ENSPVAG00000008037
N
0.717
ENSMICG00000016899
Microcebus murinus
ENSMICG00000016899
N
0.717
HNRNPH3
Myotis lucifugus
ENSMLUG00000000143
N
0.717
HNRNPH3
Ornithorhynchus anatinus
ENSOANG00000002260
N
0.717
HNRNPH3
Oryctolagus cuniculus
ENSOCUG00000004443
N
0.717
Hnrnph3
Mus musculus
ENSMUSG00000020069
N
0.717
HNRNPH3
Monodelphis domestica
ENSMODG00000017283
N
0.717
HNRNPH3
Macaca mulatta
ENSMMUG00000009792
N
0.717
ENSPPYG00000002397
Pongo pygmaeus
ENSPPYG00000002397
N
0.717
HNRNPH3
Spermophilus tridecemlineatus
ENSSTOG00000011676
N
0.717
Hnrnph3
Rattus norvegicus
ENSRNOG00000026849
N
0.717
HNRNPH3
Bos taurus
ENSBTAG00000014316
N
0.717
HNRNPH3
Cavia porcellus
ENSCPOG00000006397
N
0.717
Ame_R001515
Ailuropoda melanoleuca
Ame_R001515
N
0.717
HNRNPH3
Vicugna pacos
ENSVPAG00000011814
N
0.717
HNRNPH3
Tursiops truncatus
ENSTTRG00000013322
N
0.717
HNRNPH3
Canis familiaris
ENSCAFG00000013619
N
0.717
HNRNPH3
Sus scrofa
ENSSSCG00000010238
N
0.717
LOC100392844
Callithrix jacchus
ENSCJAG00000019154
N
0.717
Q5F3D2_CHICK
Gallus gallus
ENSGALG00000003947
N
0.710
hnrnph3
Xenopus tropicalis
ENSXETG00000023567
N
0.710
HNRNPH3
Macropus eugenii
ENSMEUG00000013139
N
0.710
HNRNPH3
Anolis carolinensis
ENSACAG00000010365
N
0.710
HNRNPH3
Sorex araneus
ENSSARG00000013863
N
0.710
HNRNPH3
Ochotona princeps
ENSOPRG00000014850
N
0.710
HNRNPH3
Taeniopygia guttata
ENSTGUG00000003609
N
0.710
AAH82630
Xenopus laevis
AAH82630
N
0.703
LOC100407750
Callithrix jacchus
ENSCJAG00000022707
N
0.703