CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RDM1
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000010030
T41762_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000008679
RRM
1
59
HSVFAVFSRFGLLYSVRVFNAAVARPGFYAVVKFYSARDAHRAQKACDQKQLFQNSPVK
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RDM1
Felis catus
ENSFCAG00000003868
N
0.900
RDM1
Erinaceus europaeus
ENSEEUG00000006127
N
0.817
RDM1
Homo sapiens
ENSG00000187456
N
0.774
RDM1
Pan troglodytes
ENSPTRG00000009031
N
0.774
ENSSSCG00000017574
Sus scrofa
ENSSSCG00000017574
N
0.774
RDM1
Pteropus vampyrus
ENSPVAG00000001116
N
0.774
Ame_R020790
Ailuropoda melanoleuca
Ame_R020790
N
0.766
LOC100063820
Equus caballus
ENSECAG00000022182
N
0.742
RDM1
Macaca mulatta
ENSMMUG00000006847
N
0.742
RDM1
Loxodonta africana
ENSLAFG00000029300
N
0.734
RDM1
Monodelphis domestica
ENSMODG00000011101
N
0.727
RDM1
Bos taurus
ENSBTAG00000000030
N
0.727
RDM1
Otolemur garnettii
ENSOGAG00000011332
N
0.716
LOC100388328
Callithrix jacchus
ENSCJAG00000015031
N
0.712
ENSPPYG00000008198
Pongo pygmaeus
ENSPPYG00000008198
N
0.712
RDM1
Oryctolagus cuniculus
ENSOCUG00000022704
N
0.710
RDM1
Choloepus hoffmanni
ENSCHOG00000010041
N
0.700